DRSC/TRiP Functional Genomics Resources

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Protein Alignment X11L and Apba2

DIOPT Version :10

Sequence 1:NP_001285376.1 Gene:X11L / 252671 FlyBaseID:FBgn0026313 Length:1170 Species:Drosophila melanogaster
Sequence 2:NP_113968.1 Gene:Apba2 / 83610 RGDID:620845 Length:750 Species:Rattus norvegicus


Alignment Length:889 Identity:334/889 - (37%)
Similarity:439/889 - (49%) Gaps:216/889 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   344 HRSPTKKPPSDQNPSTAYQEHNDIELYIDSNSRSSGDLADTELE-ANLRRHSRNFTLSPETTDYD 407
            ||:.....|.||.|     |:.|.||.::|       ...|.|| ..||..|.    :||..:..
  Rat    16 HRARPGPIPHDQEP-----ENEDTELPLES-------YVPTGLELGTLRPDSP----TPEEQECH 64

  Fly   408 SNCGDLDSLSNDINCPTDFGKLYTSMPVLEDGLS--------------------------SGHAS 446
            ::..|.||.|:.:|..::.......:|..|:|::                          ..|..
  Rat    65 NHSPDGDSSSDYVNNTSEEEDYDEGLPEEEEGVTYYIRYCPEDDSYLEGMDCNGEEYLAHGAHPV 129

  Fly   447 DTENNVSVVCDKQQSSQSQPVHEHNGNGERLENDYNVMSASLATLTTDASQSALISDFASLPMPP 511
            ||:.....|.| ...|.....|.|.....:...|                        :.||:  
  Rat   130 DTDECQEAVED-WTDSVGPHTHSHGAENSQEYPD------------------------SHLPI-- 167

  Fly   512 APPPSSPPQIEIADASESMTMVPDADNPLDSHYGAVYAAALGGTHTEKSAGSGLGVTPV---TAG 573
              |...|..:|:.|..|            |.||.....:.......|.:..:| |.:|.   ...
  Rat   168 --PEDDPTVLEVHDQEE------------DGHYCPSKESYQDYYPPETNGNTG-GASPYRMRRGD 217

  Fly   574 GSLPSQAASEIQEAMKEIRSAL------QRAKTQPEKLKFCDEVLPTDPDSPVWVPRKGTTISTA 632
            |.|..| ..:|.:.:.||:.:|      ..::..||.:...|....|:..||         ..|.
  Rat   218 GDLEEQ-EEDIDQIVAEIKMSLSMTSITSASEASPEHMPELDPGDSTEACSP---------SDTG 272

  Fly   633 QGAAADE----------------EPDTDLETDRLLGQQRHDEQDFFADQSLADNNANEGTDIASN 681
            :|.:..|                :|...|:|.....::|...........|......:.:|    
  Rat   273 RGPSRQEARPKSLNLPPEVKHSGDPQRGLKTKTRTPEERPKWPQEQVCNGLEQPRKQQRSD---- 333

  Fly   682 GHLNGTSDNNNPNPMNNSKPQTYSTATIRQGIGTSLTPNSPDICQIVGTTDISISSPEKLQFTKS 746
              |||.:||||       .|:|...|                            |.|   .|...
  Rat   334 --LNGPTDNNN-------IPETKKVA----------------------------SFP---SFVAV 358

  Fly   747 PTGSIKSLKDSANSDKKAKSRNKEGLLEPKVLIEGVLFRARYLGSTQLVCEGQPTKSTRMMQAEE 811
            |                       |..||:.||:|::|.|.|||||||:.|..|:|:.|||||:|
  Rat   359 P-----------------------GPCEPEDLIDGIIFAANYLGSTQLLSERNPSKNIRMMQAQE 400

  Fly   812 AVSRIKALA----------PEGESQPSTEVDLFISTEKIMVLNTDLKEIMMDHALRTISYIADIG 866
            ||||:|.:.          .||::|..|||||||||::|.|||.|.:|.||||||||||||||||
  Rat   401 AVSRVKRMQKAAKIKKKANSEGDAQTLTEVDLFISTQRIKVLNADTQETMMDHALRTISYIADIG 465

  Fly   867 DLVVLMARRRFVPNSVVDPSITSPLGDVPTPGIGEEESPPKEPLSKHNRTPKMICHVFESDEAQF 931
            ::|||||||| :|.|.....|.:      |||..|.:           :..|||||||||::||.
  Rat   466 NIVVLMARRR-MPRSASQDCIET------TPGAQEGK-----------KQYKMICHVFESEDAQL 512

  Fly   932 IAQSIGQAFQVAYMEFLKANGIENESLAKEMDYQEVLNSQEIFGDELEIFAKKELQKEVVVPKAK 996
            |||||||||.|||.|||:||||..|.|::: :|.:::|:||::.|:|..|:..|..||:.:.|.|
  Rat   513 IAQSIGQAFSVAYQEFLRANGINPEDLSQK-EYSDIINTQEMYNDDLIHFSNSENCKELQLEKHK 576

  Fly   997 GEILGVVIVESGWGSMLPTVVIANLMSSGAAARCGQLNIGDQLIAINGMSLVGLPLSTCQSYIRN 1061
            |||||||:|||||||:||||::||:|:.|.|||.|:|:||||:::|||.|||||||:|||..|:.
  Rat   577 GEILGVVVVESGWGSILPTVILANMMNGGPAARSGKLSIGDQIMSINGTSLVGLPLATCQGIIKG 641

  Fly  1062 AKNQTAVKFTVVPCPPVVEVKILRPKALFQLGFSVQNGVICSLLRGGIAERGGVRVGHRIIEINN 1126
            .||||.||..:|.||||..|.|.||...:|||||||||:||||:||||||||||||||||||||.
  Rat   642 LKNQTQVKLNIVSCPPVTTVLIKRPDLKYQLGFSVQNGIICSLMRGGIAERGGVRVGHRIIEING 706

  Fly  1127 QSVVAVPHDTIVKLLSSSVGEILMKTMPTSMFRLLTGQETPIYI 1170
            |||||..|:.||:.||:|||||.|||||.:|||||||||||:||
  Rat   707 QSVVATAHEKIVQALSNSVGEIHMKTMPAAMFRLLTGQETPLYI 750

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
X11LNP_001285376.1 PTB_X11 775..954 CDD:269919 105/188 (56%)
PDZ1_APBA1_3-like 988..1071 CDD:467203 55/82 (67%)
PDZ2_APBA1_3-like 1082..1154 CDD:467255 54/71 (76%)
Apba2NP_113968.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..94 25/93 (27%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 143..226 21/124 (17%)
STXBP1-binding 185..271 19/96 (20%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 241..347 23/127 (18%)
PTB_X11 364..536 CDD:269919 106/189 (56%)
PDZ1_APBA1_3-like 568..653 CDD:467203 55/84 (65%)
PDZ2_APBA1_3-like 657..734 CDD:467255 57/76 (75%)

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