DRSC/TRiP Functional Genomics Resources

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Protein Alignment X11L and Pdzk1

DIOPT Version :9

Sequence 1:NP_001285376.1 Gene:X11L / 252671 FlyBaseID:FBgn0026313 Length:1170 Species:Drosophila melanogaster
Sequence 2:NP_113900.1 Gene:Pdzk1 / 65144 RGDID:70924 Length:523 Species:Rattus norvegicus


Alignment Length:514 Identity:91/514 - (17%)
Similarity:175/514 - (34%) Gaps:148/514 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   757 SANSDKKAKSRNKEG-----LLEPKVLIEGVLFRARYLGSTQLVCEGQPTKSTRMMQAEEAVSRI 816
            |..:.::.|...|||     .|..:...:|.|.|        ::.||.|.:...::..:. |.||
  Rat     3 STFNPRECKLSKKEGQNYGFFLRIEKDTDGHLVR--------VIEEGSPAEKAGLLDGDR-VLRI 58

  Fly   817 KALAPEGESQPSTEVDLFI---STEKIMVLNTDLKEIMMDHALRTISYIADIGDLVVLMARRRFV 878
            ..:..:.|..... |||..   ::..::||:.|..|       :.:.:..|:.:|          
  Rat    59 NGVFVDKEEHAQV-VDLVRKSGNSVTLLVLDGDSYE-------KAVKHQVDLKEL---------- 105

  Fly   879 PNSVVDPSITSPLGDVPTPGIGEEESPPKEPLSKHNRTPKMICH-VFESDEAQFIAQSI------ 936
            ..|..:|::.....|:...|..|..:.|:            :|: |.|.:...|..::|      
  Rat   106 DQSPREPALNEKKPDLGMNGGVETCAQPR------------LCYLVKEGNSFGFSLKTIQGKKGV 158

  Fly   937 --------GQAFQVAYM---EFLKANG--IENESLAKEMDYQEVLNSQEIFGDELEIF------- 981
                    |.|.:...:   ..::.||  :||.|      ::||:......|..:...       
  Rat   159 FLTDITPQGVAMKAGVLADDHLIEVNGENVENAS------HEEVVEKVTKSGSRIMFLLVDKETA 217

  Fly   982 -----AKKELQKEVVVPKAKGEILGVVIVE---SGWGSMLPT------VVIANLMSSGAAARCGQ 1032
                 .|...::|....|.......||:::   :|:|..|..      .:|.:: ..|:.|....
  Rat   218 RCHSEQKTPFKRETASLKLLPHQPRVVVIKKGSNGYGFYLRAGPEQKGQIIKDI-EPGSPAEAAG 281

  Fly  1033 LNIGDQLIAINGMSLVGLPLSTCQSYIRNAKNQTAV--------------KF------------- 1070
            |...|.::|:||.|:..|...:....|||..:||.:              :|             
  Rat   282 LKNNDLVVAVNGESVEALDHDSVVEMIRNGGDQTTLLVLDKEADRIYSLARFSPLLYCQSQELPN 346

  Fly  1071 -TVVPCPPVVEVKILRPKALFQLGFSVQNGVICSLLR-------------------------GGI 1109
             :|...|..:...:..|.:............:|.|::                         ||.
  Rat   347 GSVKEAPAPISAPLEAPGSATTEDVGDHKPKLCRLIKEDDSYGFHLNAIRGQPGSFVKEVQQGGP 411

  Fly  1110 AERGGVRVGHRIIEINNQSVVAVPHDTIVKLLSSSVGEILMKTMPTSMFRLLTGQETPI 1168
            |::.|:.....|||:|.::|...|:|.:|:.:.||...:.:.......:.....::.||
  Rat   412 ADKAGLENEDIIIEVNGENVQDEPYDRVVERIKSSGEHVTLLVCGKVAYSYFQAKKIPI 470

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
X11LNP_001285376.1 PTB_X11 775..954 CDD:269919 34/201 (17%)
PDZ_signaling 988..1065 CDD:238492 20/85 (24%)
PDZ_signaling 1092..1151 CDD:238492 16/83 (19%)
Pdzk1NP_113900.1 PDZ_signaling 7..87 CDD:238492 18/89 (20%)
PDZ 132..212 CDD:214570 16/97 (16%)
PDZ_signaling 242..320 CDD:238492 20/78 (26%)
PDZ 375..455 CDD:214570 16/79 (20%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 479..523
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3528
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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