DRSC/TRiP Functional Genomics Resources

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Protein Alignment X11L and apba1b

DIOPT Version :9

Sequence 1:NP_001285376.1 Gene:X11L / 252671 FlyBaseID:FBgn0026313 Length:1170 Species:Drosophila melanogaster
Sequence 2:XP_005155643.1 Gene:apba1b / 565507 ZFINID:ZDB-GENE-070925-3 Length:971 Species:Danio rerio


Alignment Length:1132 Identity:367/1132 - (32%)
Similarity:513/1132 - (45%) Gaps:327/1132 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   196 AEYEGSPRRFGSQPNTNTITMGGPRKRP------------------------------------- 223
            |...|.|.....|||...:..|.||.||                                     
Zfish    10 AGLRGPPPHRSKQPNGTPLEGGRPRWRPCQLHNPDAESQGQHHHHYHHQAHQHASGSSRAPPRHR 74

  Fly   224 ----PGFPQRVSPTTSVANNATAAAKASVGNLIDLVDHEEERSGTLREKTPTFDYLYEFSETRKV 284
                ||..||..| .|..:.|.|..:...|      ..:..|||   |:.    |.:.:.:..|.
Zfish    75 RRHVPGQAQRRRP-ESGDSEARAGQQPKPG------ASKHHRSG---ERL----YQHRYRQQHKD 125

  Fly   285 LEEFFKANPEDEKRYTDYT-TESGDDVASSQPQEYPAT-------PMEQAYIGQRLARIPKDEL- 340
            .|:..|..|:::......: .:|..|:.:..||:.|.|       |........::.|.|:.|. 
Zfish   126 EEQHVKTPPKEQASEPLLSPDDSSQDLLTPSPQDEPVTDELDESSPDLSHSSDTQINRDPEQEQA 190

  Fly   341 --------YMVHRSPTKKPPSD--------QNPSTAYQEHNDIELYIDSNSRSSG--------DL 381
                    ..|||...|.|..:        ::.||...|.:.:...|.|.||...        |:
Zfish   191 ESSVDQPEENVHREEFKNPCEEELVKVNEVEDLSTQIPEEDYVPPKIASKSRPESKRTSPLRVDV 255

  Fly   382 -----------------ADTELEANLRRH-----------SRNFTLSPETTDYDS----NCGDLD 414
                             :......:|||:           :.|:..:....::||    :.|||.
Zfish   256 PPFATSPHQIINKPFFQSPRSFPESLRRYNSDPKSYPTFFNNNYACTRNDKEFDSPRSHDEGDLS 320

  Fly   415 SLSNDINCPTDFGKLYTSMPVLEDGLSSGHASDTENNVSVV-----------------CDKQQSS 462
            .           .:.||      |.....|..|||.:::..                 ||.||..
Zfish   321 D-----------SEAYT------DSYPESHPKDTETDLNPAFEEPQAYEMNYSMSMDECDDQQDL 368

  Fly   463 QSQPVHEHNGNGERLENDYNVMSASLATLTTDASQSAL--ISDFASLPMPPAPPPSSPPQI--EI 523
            :.:| :.|:..|.||.: |:..|...|. :...|::.|  .|...|||:...|......::  ..
Zfish   369 EEEP-NPHSAVGSRLHH-YDEQSGDEAE-SFGRSRAHLRKTSSSTSLPLEVHPQDDETSEMTQNS 430

  Fly   524 ADASESMTMVPDADNPLDSHYGAVYAAALGGTHTEKSAGSGLGVTPVTAGGSLPSQAASEIQEAM 588
            .|..|.:..||:..:.:                ||....:|..|          |.|..:|:||:
Zfish   431 TDLQEEVEDVPEKQDQI----------------TESCKATGDAV----------SLAIRDIKEAI 469

  Fly   589 KEIRSALQRAKTQPEKLKFCDEVLPTDPDSPVWVPRKGTTISTAQGAAADEEPDTDLETDRLLGQ 653
            :|:::...|:...|:|:           ..||||.|:                            
Zfish   470 EEVKTKTVRSPYMPDKI-----------TEPVWVMRQ---------------------------- 495

  Fly   654 QRHDEQDFFADQSLADNNANEGTDIASNGHLNGTSDNNNPNPMNNSKPQTYSTATIRQGIGTSLT 718
                                   |:               :|:..|.||.:|            .
Zfish   496 -----------------------DV---------------SPVEESHPQIHS------------Y 510

  Fly   719 PNSPDICQIVGTTDISISSPE---KLQFTKSPTGSIKS----------LKDSANSDKKAKSR--- 767
            |.||  ||      ||.|||:   .:|..:.|.|:..|          |..:..|:::.||.   
Zfish   511 PQSP--CQ------ISQSSPQYAAPIQDAEPPLGAESSGVLHQDQDQELCPNVPSEEQRKSLASF 567

  Fly   768 ----NKEGLLEPKVLIEGVLFRARYLGSTQLVCEGQPTKSTRMMQAEEAVSRIKALAPEG----- 823
                :..|..:|:.||:|::|.|.|||||||:.|..||||.||.||:||:||::....:.     
Zfish   568 PTYVDVPGPCDPEDLIDGIIFAANYLGSTQLLSERTPTKSARMQQAQEAMSRVRTAQAQAKIRNK 632

  Fly   824 ---ESQP--STEVDLFISTEKIMVLNTDLKEIMMDHALRTISYIADIGDLVVLMARRRFVPNSVV 883
               ||.|  .|||||||||::|.||:...::.||||.|||||||||||::|||||||:.:.:...
Zfish   633 QGTESGPPSCTEVDLFISTQRIKVLSAYTQDTMMDHPLRTISYIADIGNMVVLMARRKMIRSQSA 697

  Fly   884 DPSITSPLGDVPTPGIGEEESPPKEPLSKHNRTPKMICHVFESDEAQFIAQSIGQAFQVAYMEFL 948
            ..::.:            .|:....|.....|..|||||||||::||.|||||||||.|||.|||
Zfish   698 QENLDT------------AETQHTNPARDDRRQYKMICHVFESEDAQLIAQSIGQAFSVAYQEFL 750

  Fly   949 KANGIENESLAKEMDYQEVLNSQEIFGDELEIFAKKELQKEVVVPKAKGEILGVVIVESGWGSML 1013
            :||||:.|.|: :.:|.::||:|:::.|:|..|:|.|..::|.:.|.||||||||||||||||:|
Zfish   751 RANGIDPEDLS-QREYSDLLNTQDMYNDDLIHFSKSENCRDVYIEKQKGEILGVVIVESGWGSIL 814

  Fly  1014 PTVVIANLMSSGAAARCGQLNIGDQLIAINGMSLVGLPLSTCQSYIRNAKNQTAVKFTVVPCPPV 1078
            |||:||:||..|.||:.|:||||||::.:||.||||||||||||.|:..|:|:.:|..:|.||||
Zfish   815 PTVIIASLMHGGPAAKSGRLNIGDQIMTVNGTSLVGLPLSTCQSIIKGLKSQSRIKMNIVRCPPV 879

  Fly  1079 VEVKILRPKALFQLGFSVQNGVICSLLRGGIAERGGVRVGHRIIEINNQSVVAVPHDTIVKLLSS 1143
            ..|.|.||...:|||||||||:||||:||||||||||||||||||||.|||||.||:.||.:||:
Zfish   880 TMVLIRRPDLRYQLGFSVQNGIICSLMRGGIAERGGVRVGHRIIEINGQSVVATPHEKIVHILSN 944

  Fly  1144 SVGEILMKTMPTSMFRLLTGQETPIYI 1170
            :||||.|||||.:|:||||.||.|:||
Zfish   945 AVGEIHMKTMPAAMYRLLTAQEQPVYI 971

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
X11LNP_001285376.1 PTB_X11 775..954 CDD:269919 95/188 (51%)
PDZ_signaling 988..1065 CDD:238492 52/76 (68%)
PDZ_signaling 1092..1151 CDD:238492 47/58 (81%)
apba1bXP_005155643.1 PTB_X11 579..757 CDD:269919 96/189 (51%)
PDZ 790..873 CDD:278991 54/82 (66%)
PDZ_signaling 879..952 CDD:238492 53/72 (74%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 175 1.000 Domainoid score I3583
eggNOG 1 0.900 - - E1_KOG3605
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 530 1.000 Inparanoid score I1184
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm6563
orthoMCL 1 0.900 - - OOG6_104247
Panther 1 1.100 - - O PTHR12345
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1305
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
109.820

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