DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment X11L and grid2ipb

DIOPT Version :9

Sequence 1:NP_001285376.1 Gene:X11L / 252671 FlyBaseID:FBgn0026313 Length:1170 Species:Drosophila melanogaster
Sequence 2:XP_009304908.1 Gene:grid2ipb / 559717 ZFINID:ZDB-GENE-040724-161 Length:1383 Species:Danio rerio


Alignment Length:1276 Identity:225/1276 - (17%)
Similarity:376/1276 - (29%) Gaps:471/1276 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 DSSNESMVNPPHIQMNFGQ---QAQQQQSHQHQQQQQQQERYVWEMRTRSPNVTPASTVLNSPDL 69
            ::.::|::|......:.|:   :.::.:|..|.::.|..:|     .:..|..|......|...|
Zfish   258 EAVSQSLINRMCRSKSLGEPQNRLRRSRSQDHHERPQGSKR-----ASSVPRDTGDEPAQNDRTL 317

  Fly    70 NGELSYVPLQGLSPSGGGV--------QGSGSYGSNAGRDSGSYYYQRPQLHQIRLGRSPGSQFE 126
            ....:.:|.|.:|    ||        :|..|:|                             |.
Zfish   318 RKSNTMIPTQYVS----GVNQRTIRVYRGKKSFG-----------------------------FT 349

  Fly   127 TRDVLPQGLAS--PGSPTDVGKADGQC-LRDGEIVVF-DDIDTNWMNKASSGQRPGSNEDVLKVT 187
            .|...|..:.|  ||||.:.      | |:.|:.::| :.:|          .|..|:|.|:.:.
Zfish   350 LRGHAPVWIDSVMPGSPAEA------CGLKTGDRILFLNGLD----------MRNCSHEKVVSML 398

  Fly   188 KMIGQLPIAEYEGSPRRFGSQPNTNTITMGGPRKRPPG---------------------FPQRVS 231
            :..|.:|....|..|..:....:....|...||.|.|.                     |.|::.
Zfish   399 QGSGAMPSLVVEEGPVDYPQSDSEPEETPSAPRSRSPALSSLQWVAEILPPSIRVHGRTFSQQLE 463

  Fly   232 PTTSVANNAT--------------------------AAAKASVGNLI-DLVDHEEER-------- 261
            ...::....|                          ..||..:...| .|:.:||:.        
Zfish   464 HLLTLQERYTICKALETFFQHRNVDTLIVDVFPVLDTPAKQLIWQFIYQLLTYEEQEHCKTKIAR 528

  Fly   262 ------------------------SG-----TLREKTP------------TFDYLYEFSETRKVL 285
                                    ||     |:||::.            ||        |..|.
Zfish   529 FLGFKSAEPEVGAETHRRSSSMRVSGTSHKNTVRERSSDDCIIGTHLGMGTF--------TDPVT 585

  Fly   286 EE--------FFKANPEDEKRYTDYTTESGD--DVASSQPQEYPATP----------------ME 324
            .|        .|..:| |....|...||.|:  .|.|||..:..::|                ..
Zfish   586 PEERQCGDGTSFPESP-DLSHMTGVYTELGNVYPVKSSQSLQSHSSPRAAGMGLAESNTYTQSFT 649

  Fly   325 QAYIGQRLARI----------PKDELYMVHRSPTKKPPS-DQNPSTAYQEHNDIELYIDSNSRSS 378
            .:..|.|.:.:          |:.|.|   :.....|.| |.||            |:..:|..:
Zfish   650 HSTAGNRKSGLSLTWTDSFPGPQFETY---QQTVASPDSVDSNP------------YVSLDSPPA 699

  Fly   379 GDLADTELEANLRRHSRNFTLS--PETTDYDSNCGDLDSLSND----INCPTDFGKLYTSMPVLE 437
            ..|...|| :.|.:..:.||.|  |.:.|.|.   .||:||..    :|...||           
Zfish   700 SPLPSDEL-SPLPQRRKLFTFSRPPRSRDTDK---FLDALSEQLGHRVNIVDDF----------- 749

  Fly   438 DGLSSGHASDTENNVSVVCDKQQSSQSQPVHEHNGNGERLENDYNVMSASLATLTT-------DA 495
                .|..:|.|         :.|.|.             |.:.|::...|::.::       |:
Zfish   750 ----KGGENDYE---------EMSFQD-------------EQEVNMLPHELSSASSEDHSSSDDS 788

  Fly   496 SQSALISDFASLPMPPAPPPSSPPQIEIADASESMTMVPD------------------------- 535
            :..:..|....:|.||..||..||.::..|:...:.:.|:                         
Zfish   789 TSVSYSSGSDHIPPPPQSPPPPPPPLQFTDSPSPLPITPEHLPQPPPAFQHHPIIAPPPPPPRPF 853

  Fly   536 -ADNP-------------------------------LDSHYGAVYAAALGGTHTEKSAGSGLGVT 568
             |:.|                               |..|....:.......||...       .
Zfish   854 LANRPSLHKVLPTREELRAQHSHPRRSSPQPSSQPILQLHQPKAHPILQSSPHTSPQ-------P 911

  Fly   569 PVTAGGSL----PSQAASEIQE-AMKEIRSALQRAK---TQPEKLKF---CDEVLPTDPDSPVWV 622
            |.|:....    |||:..:.|: .:.....:|.:.|   :||.:..|   ....:|..|..|:..
Zfish   912 PHTSAQHTRLQHPSQSIYQSQQTTVPRTSPSLTKQKSLHSQPSQQSFEGTLSSKVPPPPPPPLPP 976

  Fly   623 PRKGTTISTAQGAAADEEPDTDLETDRLLGQQRHDEQDFFADQSLADNNANEGTDIASNGHLN-- 685
            |.....:......|:|   :..:...||..:|..:.:.....|...|.:.::.:|:.....|:  
Zfish   977 PCDPPPLPKPSPKASD---NNHMSVKRLRWEQVENSEGTIWGQLGDDPDYHKLSDMVKYLDLDLY 1038

  Fly   686 -GTSDNN----NPN--PMNNSKPQTYSTATIRQGIGTS-------LTPNS-PDICQIVGTTDISI 735
             ||..|:    .|.  |.|..|.......:.::....|       |.|.. .||...:.|     
Zfish  1039 FGTQRNSISLPEPTFLPENLKKKDVVEILSHKKAYNASILIAHLKLAPKELRDILMTMST----- 1098

  Fly   736 SSPEKLQFTKSPTGSIKSLKDSANSDKKAK-----SRNKEGLLEP-------------KVLIEGV 782
               |:|:     ...||.|...|..|::.|     .::...|.||             |..:..:
Zfish  1099 ---ERLE-----PAHIKQLLLYAPDDEEVKQFQHYDQDPAKLSEPDQFVLQMLLVPEYKTRLRSL 1155

  Fly   783 LFRAR---------------YLGSTQLVCEGQPTKSTRMMQAEEAVSRIKALAPEGESQPSTEVD 832
            ||:..               |..|.:|      ..|.|:.:..|.|..:......|  ||.|...
Zfish  1156 LFKTTVQEKTEEMRAAYECIYKASLEL------KNSKRLAKILEFVLAMGNYLNNG--QPKTNKT 1212

  Fly   833 LFISTEKIMVLNTD------------LKEIMMDHALRTISYIADIGDLVVLMARRRFVPNSVVDP 885
            .......:..|||.            |.:.:..|....:.:..|:  :.|.:|.:      |...
Zfish  1213 TGFKINFLTELNTTKTVDGKSTFLHILAKSLCQHFPELLGFSRDL--ITVPLAAK------VNQR 1269

  Fly   886 SITSPLGDVPTPGIGEEESPPKEPLSKHNRTPKMI------CHVFESDEAQFIAQSIGQAFQVAY 944
            :||:.|.||.:.......:..|.|.:..:|...::      ||.        ..||:....|.|.
Zfish  1270 TITADLSDVHSTIQDIRTACVKIPATAEDRFAAVMSSFLENCHP--------AVQSLDSLQQRAM 1326

  Fly   945 MEFLKANGIENESLAKEMDYQEVLNSQEIFGDELEIFAKKE 985
            .||.|......|.       .:|..::..||...|..:|.|
Zfish  1327 DEFHKVASYFGED-------SKVTTTETFFGIFAEFISKFE 1360

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
X11LNP_001285376.1 PTB_X11 775..954 CDD:269919 41/224 (18%)
PDZ_signaling 988..1065 CDD:238492
PDZ_signaling 1092..1151 CDD:238492
grid2ipbXP_009304908.1 PDZ_signaling 9..69 CDD:238492
PDZ_signaling 80..156 CDD:238492
HN_L-delphilin-R1_like 183..262 CDD:259820 0/3 (0%)
PDZ_signaling 335..410 CDD:238492 22/119 (18%)
HN_L-delphilin-R2_like 451..530 CDD:259821 9/78 (12%)
FH2 995..1360 CDD:280362 77/408 (19%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3528
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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