DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment X11L and apba2b

DIOPT Version :9

Sequence 1:NP_001285376.1 Gene:X11L / 252671 FlyBaseID:FBgn0026313 Length:1170 Species:Drosophila melanogaster
Sequence 2:XP_005168985.1 Gene:apba2b / 327160 ZFINID:ZDB-GENE-030131-5371 Length:834 Species:Danio rerio


Alignment Length:920 Identity:336/920 - (36%)
Similarity:452/920 - (49%) Gaps:216/920 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   352 PSDQNPSTAYQEHNDIELYIDS-NSRSSGDLAD-------TELEANLRRHSR------------- 395
            |..::|...|:||:|.|:...| :::...||.|       |...|:...||.             
Zfish    30 PDPEHPEEEYEEHHDPEVTQHSYHNQEEADLTDSRPTTPTTPDHAHRDYHSHPDSLDGDSSSDYV 94

  Fly   396 NFTLSPETTDYDSN--------------CGDLDSLSNDINC--------------PTDFGKLYTS 432
            |.|...|..|:|..              |.:.||....::|              |.|..:...:
Zfish    95 NNTSDEEEDDFDEGLPEEDEGVTYYIRYCPEDDSYLEGMDCNDPEYVHPDGRMEPPPDTDECQEA 159

  Fly   433 MPVLEDGLSSGHA---------SDTENNVSVVCD--KQQSSQS------QPVHEHNGNGERLEND 480
            :....:|......         .|.:::..|.|:  :|.|.|.      :||.:|:.:     ..
Zfish   160 VEEWVEGEDDAQGDEDDDDEEEDDDDDDGEVRCEVLEQDSDQQLYDGRPEPVLDHHHH-----QH 219

  Fly   481 YNVMSASLATLTTDASQSALISDFASLPMPPAPPPSSPPQIEIADASE----SMTMVPDADNPLD 541
            |           ||..|..|            |||....:::..::||    .....|......:
Zfish   220 Y-----------TDPHQEQL------------PPPIEDQEVKDVESSERYCPDQEEEPQVGRDRE 261

  Fly   542 SHYGAVYAAALGGTHTEKSAGSGLGVTPVTAGGSLPSQAASEIQEAMKEIRSALQRAKTQPEKLK 606
            .:.|..||....|.....|...|...|.    |....:|..:|.:.:.||:.::..........:
Zfish   262 GYAGDYYATEDNGNSVRASPYRGHKGTE----GETGEEAEEDIDQIVAEIKMSMSMGSLSSGTDQ 322

  Fly   607 FCDEVLPTDPDSPVWVPRKGTTISTAQGAAA--------DEEPDT--------DLETDRLLGQQR 655
            ..:|:.| ||....:.|.   |.|..:.|.|        |..|.:        :.|..|....:.
Zfish   323 SPEELAP-DPAPSGYQPE---TRSKPEPAPAPYPQPHRHDGRPKSLNIPPARHNPELQRNFKVRP 383

  Fly   656 H---DEQDFFADQSLAD-NNANEGTDIASNGHLNGTSDNNNPNPMNNSKPQTYSTATIRQGIGTS 716
            |   |.|.:..||.... :|..|.........|||..:|||                        
Zfish   384 HTPEDRQRWTQDQVREQMSNGAEQPRKQQRSDLNGPLENNN------------------------ 424

  Fly   717 LTPNSPDICQIVGTTDISISSPEKLQFTKSPTGSIKSLKDSANSDKKAKSRNKEGLLEPKVLIEG 781
                              ::.|.|      .|.|..|..|            ..|..||:.||:|
Zfish   425 ------------------VTEPTK------KTASFPSFVD------------VPGPCEPEDLIDG 453

  Fly   782 VLFRARYLGSTQLVCEGQPTKSTRMMQAEEAVSRI-----------KALAPEGESQPSTEVDLFI 835
            ::|.|.|||||||:.|..|:|:.|||||:|||||:           ||.:|||::|..|||||||
Zfish   454 IIFAANYLGSTQLLSERNPSKNIRMMQAQEAVSRVKRVQKAAKIKKKAQSPEGDAQTLTEVDLFI 518

  Fly   836 STEKIMVLNTDLKEIMMDHALRTISYIADIGDLVVLMARRRFVPNSVVDPSITSPLGDVPTPGIG 900
            ||::|.|||.|.:|.|||:||||||||||||::|||||||| :|.:.....|.:      |||..
Zfish   519 STQRIKVLNADTQETMMDNALRTISYIADIGNIVVLMARRR-MPRTASQDCIET------TPGAP 576

  Fly   901 EEESPPKEPLSKHNRTPKMICHVFESDEAQFIAQSIGQAFQVAYMEFLKANGIENESLAKEMDYQ 965
            |.:           :..|||||||||::||.|||||||||.|||.|||:||||..|.|::: :|.
Zfish   577 EAK-----------KQYKMICHVFESEDAQLIAQSIGQAFSVAYQEFLRANGINPEDLSQK-EYS 629

  Fly   966 EVLNSQEIFGDELEIFAKKELQKEVVVPKAKGEILGVVIVESGWGSMLPTVVIANLMSSGAAARC 1030
            :::|:||::.|:|..|:..:..||:.:.|.||||||:|||||||||:||||::||:|:.|.|||.
Zfish   630 DIINTQEMYNDDLIHFSNSDNCKELQLEKQKGEILGIVIVESGWGSILPTVILANMMNGGPAARS 694

  Fly  1031 GQLNIGDQLIAINGMSLVGLPLSTCQSYIRNAKNQTAVKFTVVPCPPVVEVKILRPKALFQLGFS 1095
            |:|:||||:::||..|||||||:|||..|:..|||..||..:|.||||..|.|.||...:|||||
Zfish   695 GKLSIGDQIMSINNTSLVGLPLATCQGIIKGLKNQVQVKLNIVSCPPVTTVLIKRPDLKYQLGFS 759

  Fly  1096 VQNGVICSLLRGGIAERGGVRVGHRIIEINNQSVVAVPHDTIVKLLSSSVGEILMKTMPTSMFRL 1160
            ||||:||||:||||||||||||||||||||.|||||..|:.||:.||:|||||.|||||.:||||
Zfish   760 VQNGIICSLMRGGIAERGGVRVGHRIIEINGQSVVATAHEKIVQALSNSVGEIHMKTMPAAMFRL 824

  Fly  1161 LTGQETPIYI 1170
            |||||||:||
Zfish   825 LTGQETPMYI 834

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
X11LNP_001285376.1 PTB_X11 775..954 CDD:269919 105/189 (56%)
PDZ_signaling 988..1065 CDD:238492 49/76 (64%)
PDZ_signaling 1092..1151 CDD:238492 47/58 (81%)
apba2bXP_005168985.1 PTB_X11 447..620 CDD:269919 106/190 (56%)
PDZ 653..734 CDD:278991 51/80 (64%)
PDZ 746..817 CDD:278991 53/70 (76%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 175 1.000 Domainoid score I3583
eggNOG 1 0.900 - - E1_KOG3605
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 530 1.000 Inparanoid score I1184
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0002645
OrthoInspector 1 1.000 - - mtm6563
orthoMCL 1 0.900 - - OOG6_104247
Panther 1 1.100 - - O PTHR12345
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2607
SonicParanoid 1 1.000 - - X1305
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1312.850

Return to query results.
Submit another query.