DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment X11L and Cytip

DIOPT Version :9

Sequence 1:NP_001285376.1 Gene:X11L / 252671 FlyBaseID:FBgn0026313 Length:1170 Species:Drosophila melanogaster
Sequence 2:NP_001012086.1 Gene:Cytip / 311047 RGDID:1307990 Length:359 Species:Rattus norvegicus


Alignment Length:79 Identity:18/79 - (22%)
Similarity:31/79 - (39%) Gaps:14/79 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly  1093 GFSVQN--------------GVICSLLRGGIAERGGVRVGHRIIEINNQSVVAVPHDTIVKLLSS 1143
            ||.:|.              .:||.:.....|...|::||.....:|..|.....|..:|.|:.|
  Rat    89 GFEIQTYRLQNQNICSSEVCTMICKVQEDSPAHCAGLQVGDIFANVNGVSTEGFTHKQVVDLIRS 153

  Fly  1144 SVGEILMKTMPTSM 1157
            |...:.::|:..:|
  Rat   154 SGNLLTIETLNGTM 167

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
X11LNP_001285376.1 PTB_X11 775..954 CDD:269919
PDZ_signaling 988..1065 CDD:238492
PDZ_signaling 1092..1151 CDD:238492 16/71 (23%)
CytipNP_001012086.1 PDZ_signaling 76..161 CDD:238492 16/71 (23%)
Interaction with CYTH1. /evidence=ECO:0000250 166..188 1/2 (50%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3528
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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