DRSC/TRiP Functional Genomics Resources

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Protein Alignment X11L and Patj

DIOPT Version :9

Sequence 1:NP_001285376.1 Gene:X11L / 252671 FlyBaseID:FBgn0026313 Length:1170 Species:Drosophila melanogaster
Sequence 2:NP_766284.2 Gene:Patj / 12695 MGIID:1277960 Length:1834 Species:Mus musculus


Alignment Length:1404 Identity:278/1404 - (19%)
Similarity:462/1404 - (32%) Gaps:499/1404 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   126 ETRDVLPQGLASPGSPTDVGKADGQCL--RDGEIVVFDDIDTNWMNKASSGQRPGSNEDVLKVTK 188
            |..||.|:.:  ||||.:..|:..:.|  .|.|::|           |:...:...:|::.|.:|
Mouse   512 EKPDVYPEKV--PGSPENELKSRWENLLGPDYEVMV-----------ATLDAQIADDEELQKYSK 563

  Fly   189 MIGQLPIAEYEGSPRRFGSQPNT-------NTITMGGP-------------------------RK 221
            :   |||     ...|.|.:.::       :::..|||                         |:
Mouse   564 L---LPI-----HTLRLGMEVDSFDGHHYISSVAPGGPVDTLNLLQPEDELLEVNGMQLYGKSRR 620

  Fly   222 RPPGFPQRVSP-------------TTSVANNAT---AAAKASVGNLIDLVDHEEERSGTLREKTP 270
            ....|.:.|.|             ..||....|   |..:|.|.:.:| |:.|::..|.|...:|
Mouse   621 EAVSFLKEVPPPFTLVCCRRLFDDEASVDEPRTMEPALLEAEVDHSVD-VNIEDDDDGELALWSP 684

  Fly   271 -----------------TFDYLYEFSETRKVL--------------------------------- 285
                             ..||......||.|:                                 
Mouse   685 EVKTVELVKDCKGLGFSILDYQDPLDPTRSVIVIRSLVADGVAERSGELLPGDRLVSVNEFSLDN 749

  Fly   286 ------EEFFKANP-------------EDEK--RYTDYTTESGD---------DVASSQPQEYPA 320
                  .|..||.|             ||||  |::.::..:||         ::.||...|.|.
Mouse   750 ATLAEAVEVLKAVPPGVVHLGICKPLVEDEKEERFSLHSNNNGDSSEPADAVHEIHSSLILEAPQ 814

  Fly   321 TPMEQAYIGQRLARIPKDELYM-VHRSPTKKPPSDQNPSTAYQEHNDIELYIDSNSRSSGDLADT 384
            ...::.|:.:.:     ||.:: :.:|...:.....:.|.|::.|..:...:|........|.|.
Mouse   815 GFRDEPYLEELV-----DEPFLDLGKSLQFQQKDVDSSSEAWEMHEFLSPPLDGRGEEREMLVDE 874

  Fly   385 ELEANLRRHSRNFTLSPETTDYDSNCGDLDSLSNDINCPTDFGKLYTSMPVLEDGLSSG----HA 445
            |.|. .:.|.|....:|.                    |....:...:.||||  |.:|    ||
Mouse   875 EYEL-YQDHLRAMESNPP--------------------PPHIREAAPASPVLE--LQAGTQWLHA 916

  Fly   446 S----------DTENNVSVV-CDKQQSSQS--------------QPVHEHNGNGERLEND----- 480
            :          |.|:.:|.. .:.||.|.|              .|:....|||:....|     
Mouse   917 NLSGGERLECHDAESMMSAYPQEMQQYSYSTADMMEETFGLDSRAPIPSSEGNGQHGRFDDMGHL 981

  Fly   481 YNVMSASL---ATLTTDASQSALISDFAS---------LPMPPAP------PPSSPPQIEIADAS 527
            :::.|:||   ..:.:|.....::.|..:         ||:...|      .|||...:..:..:
Mouse   982 HSLTSSSLDLGMMIPSDLQGPGVLVDLPAVAQRREQEDLPLYRLPSARVVTKPSSHMGLVSSRHA 1046

  Fly   528 ESMTMVPD------ADNPLDSHYGAVYAAALGGTHTEKSAGSGLGVTPVTAGGSLPSQAASEIQE 586
            .:...:|:      .:.|..||:|......:   ..|.:...|:.:    .||          |.
Mouse  1047 NAACELPEREEGEGEETPNFSHWGPPRIVEI---FREPNVSLGISI----VGG----------QT 1094

  Fly   587 AMKEIRSALQRAKTQPEKLK--FCDEVLPTDPDSPVWVPRKGTTISTAQGAAADEEPDTDLETDR 649
            .:|.:::.        |:||  |..:||   .|||.     |.|.:...|....|....||:   
Mouse  1095 VIKRLKNG--------EELKGIFIKQVL---EDSPA-----GKTNALKTGDKILEVSGVDLQ--- 1140

  Fly   650 LLGQQRHDE----------QDFFADQSLADNNA------NEGTDIASNGHLN---------GTSD 689
               ...|.|          ...|..|||:....      |:|...|.|...|         ||: 
Mouse  1141 ---NASHAEAVEAIKSAGNPVVFVVQSLSSTPRVIPTVNNKGKTPAPNQDQNTQERKAKRHGTA- 1201

  Fly   690 NNNPNPMNNSKPQTYSTATIRQGIGTSLTPNSPDICQIVGTTDISISS-----PEKL---QFTKS 746
               |.||....|....:|.:.         .|.:.|.:   ||..|..     |.:|   :..|.
Mouse  1202 ---PPPMKLPPPYRAPSADME---------GSEEDCAL---TDKKIRQRYADLPGELHIIELEKD 1251

  Fly   747 PTGSIKSLKDSANSDKKAKS-----RNKEG-------------LLEPKVLIEGVLFRARYLGSTQ 793
            ..|...||  :.|.|:...|     .|.||             |||    |...:...|...:..
Mouse  1252 KNGLGLSL--AGNKDRSRMSIFVVGINPEGPAAADGRMRIGDELLE----INNQILYGRSHQNAS 1310

  Fly   794 LVCEGQPTK-STRMMQAEEAVSRIKALA--PEGESQPSTEVDL----FISTEKIMVLNT------ 845
            .:.:..||: ....::.|:|||:: |:|  ||....||...||    .:|:|:...::.      
Mouse  1311 AIIKTAPTRVKLVFIRNEDAVSQM-AVAPFPELSHSPSPVEDLGGTELVSSEEESSVDAKHLPEP 1374

  Fly   846 ------DLKEIMMDHALRTISYIADIGDLVVLMARRRFVPNSVVDPSITSPLGDVP--------T 896
                  ||.:::.|:.:......::..|......:::.....|...|..||....|        .
Mouse  1375 ESSKPEDLSQVVDDNMVAEQQKESESPDSAACQIKQQTYSTQVSSSSQDSPSSPAPLCQSAHADV 1439

  Fly   897 PGIGEEESP-PKE--PLSKHNRTPKMICHVFESDEAQFIAQSIGQA------------------F 940
            .|.|..::| |.:  |||....|    |.:....| ..|..|.|::                  .
Mouse  1440 TGSGNFQAPLPVDPAPLSVDPAT----CPIVPGQE-MIIEISKGRSGLGLSIVGGKDTPLDAIVI 1499

  Fly   941 QVAYME--------------FLKANGIENESLAKEMDYQEVLNSQE-----IFGDELEIFAKKEL 986
            ...|.|              .|:.||::..|.:.|.....:..:.:     ::.||.:...::.|
Mouse  1500 HEVYEEGAAARDGRLWAGDQILEVNGVDLRSSSHEEAITALRQTPQKVRLVVYRDEAQYRDEENL 1564

  Fly   987 QKEVV-VPKAKGEILGVVIV--ESGWGSMLPTVVIANLMSSGAAARCGQLNIGDQLIAING---- 1044
            :..:| :.|..|..||:.||  .||.|     |.|::::..|||...|:|..|||::::||    
Mouse  1565 EVFLVDLQKKTGRGLGLSIVGKRSGSG-----VFISDIVKGGAADLDGRLIRGDQILSVNGEDMR 1624

  Fly  1045 --------------MSLVGLPL--------------------------STCQ----SYIRNAKNQ 1065
                          ..||.|.:                          |:|:    ..|.:.:|.
Mouse  1625 HASQETVATILKCVQGLVQLEIGRLRAGSWAASRKTSQNSQGDQHSAHSSCRPSFAPVITSLQNL 1689

  Fly  1066 TAVKFTVVPCPPVVE-----VKILRPKALFQLGFSVQNG----------VICSLLRGGIAER-GG 1114
            ...|.:..|.....|     |:|:| :....||.|:..|          .|..:...|:|.| ..
Mouse  1690 VGTKRSSDPPQKCTEEEPRTVEIIR-ELSDALGISIAGGKGSPLGDIPIFIAMIQANGVAARTQK 1753

  Fly  1115 VRVGHRIIEINNQSVVAVPHDTIVKLLSSSVGEILMKTM 1153
            ::||.||:.||.|.:..:.|...|.||.::.|.|:::.:
Mouse  1754 LKVGDRIVSINGQPLDGLSHTDAVNLLKNAFGRIILQVV 1792

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
X11LNP_001285376.1 PTB_X11 775..954 CDD:269919 45/240 (19%)
PDZ_signaling 988..1065 CDD:238492 28/127 (22%)
PDZ_signaling 1092..1151 CDD:238492 21/69 (30%)
PatjNP_766284.2 L27_2 8..65 CDD:312549
PDZ_signaling 135..218 CDD:238492
PDZ_signaling 248..325 CDD:238492
PDZ_signaling 363..450 CDD:238492
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 456..488
PDZ_signaling 572..636 CDD:238492 8/63 (13%)
PDZ 685..774 CDD:214570 9/88 (10%)
PDZ_signaling 1072..1163 CDD:238492 24/129 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1171..1219 12/51 (24%)
PDZ 1242..1327 CDD:214570 18/90 (20%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1340..1453 21/112 (19%)
MPDZ_u10 <1453..1468 CDD:374710 5/18 (28%)
PDZ 1469..1554 CDD:214570 11/85 (13%)
PDZ_signaling 1566..1646 CDD:238492 25/84 (30%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1657..1676 1/18 (6%)
PDZ_signaling 1707..1792 CDD:238492 24/85 (28%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1811..1834
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3528
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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