DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment X11L and PATJ

DIOPT Version :9

Sequence 1:NP_001285376.1 Gene:X11L / 252671 FlyBaseID:FBgn0026313 Length:1170 Species:Drosophila melanogaster
Sequence 2:XP_011538764.1 Gene:PATJ / 10207 HGNCID:28881 Length:1937 Species:Homo sapiens


Alignment Length:1244 Identity:241/1244 - (19%)
Similarity:411/1244 - (33%) Gaps:479/1244 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly   234 TSVANNATAAAKASVGNLIDL-------VDHEEE-----RSGTLREKTPTFDYLYEFSETRKVL- 285
            ||:| .|....||....|:.|       .|:|||     .|.:..:||       |||.|...: 
Human   748 TSLA-EAVEILKAVPPGLVHLGICKPLVEDNEEESCYILHSSSNEDKT-------EFSGTIHDIN 804

  Fly   286 -------------EEFFKANPEDE------KRYTDYTTESGDDVASSQPQEYPATPMEQAYIGQR 331
                         |.:||....||      |.:.....|......:.:..|: .||..|....:|
Human   805 SSLILEAPKGFRDEPYFKEELVDEPFLDLGKSFHSQQKEIEQSKEAWEMHEF-LTPRLQEMDEER 868

  Fly   332 LARIPKDELYMVHRSPTKKPPSDQNPSTAYQEHNDI----ELYIDSNSRSSGDLADTELEANLRR 392
              .|..||.|.:::.|:  |..:..|.:..||...:    ||:..:......:.:::: ||...|
Human   869 --EILVDEEYELYQDPS--PSMELYPLSHIQEATPVPSVNELHFGTQWLHDNEPSESQ-EARTGR 928

  Fly   393 -----------------HSRNFTL----SPETTDYDSNCG----------------DLDSLSNDI 420
                             ...||.:    |..:|:.:|..|                ||..:.||:
Human   929 TVYSQEAQPYGYCPENVMKENFVMESLPSVPSTEGNSQQGRFDDLENLNSLAKTSLDLGMIPNDV 993

  Fly   421 NCPTDFGKLYTSMPVL------ED--------------------GLSSGHASDTENNVSVVCD-- 457
            ..|:    |...:||:      ||                    .|||.:|:||       |:  
Human   994 QGPS----LLIDLPVVAQRREQEDLPLYQHQATRVISKASAYTGMLSSRYATDT-------CELP 1047

  Fly   458 --KQQSSQSQPVHEHNG------------------------------NGERLENDY--NVMSASL 488
              ::...:..|...|.|                              |||.|:..:  .|:..|.
Human  1048 EREEGEGEETPNFSHWGPPRIVEIFREPNVSLGISIVGGQTVIKRLKNGEELKGIFIKQVLEDSP 1112

  Fly   489 ATLTTDASQSALISDFASLPMPPAPPPSSPPQIEIADASESMTMVPDADNPLDSHYGAVYAAALG 553
            |..|........|.:.:.:            .::.|..||::..:.:|.||:      |:..   
Human  1113 AGKTNALKTGDKILEVSGV------------DLQNASHSEAVEAIKNAGNPV------VFIV--- 1156

  Fly   554 GTHTEKSAGSGLGVTP--------VTAGGSLPSQAASEIQEAMKEIRSALQRAKTQPEKLKFCDE 610
                 :|..|...|.|        :|...:..:|...|            :|..|.|..:|    
Human  1157 -----QSLSSTPRVIPNVHNKANKITGNQNQDTQEKKE------------KRQGTAPPPMK---- 1200

  Fly   611 VLPTDPDSPVWVPRKGTTISTAQGAAADEEPDTDLETDRLLGQQRHDEQDFFADQSLADNNANEG 675
             ||.        |.|..|            .|:|          .::|:|.|.||.:....|   
Human  1201 -LPP--------PYKALT------------DDSD----------ENEEEDAFTDQKIRQRYA--- 1231

  Fly   676 TDIASNGHL-------NG----TSDNNNPNPMN----NSKPQTYSTATIRQGIGTSLTPNSPDIC 725
             |:....|:       ||    .:.|.:.:.|:    ...|:..:.|..|..||..|...:..| 
Human  1232 -DLPGELHIIELEKDKNGLGLSLAGNKDRSRMSIFVVGINPEGPAAADGRMRIGDELLEINNQI- 1294

  Fly   726 QIVGTTDISIS-------SPEKLQFTKS--------------PTGSIKSLKDSANSDKKAKSRNK 769
             :.|.:..:.|       |..||.|.::              |:.|..|::|.:.::  ..|..:
Human  1295 -LYGRSHQNASAIIKTAPSKVKLVFIRNEDAVNQMAVTPFPVPSSSPSSIEDQSGTE--PISSEE 1356

  Fly   770 EGLLEP--KVLIEGVLFRARYLGSTQLVCEGQPTKSTRMMQ--AEEAVSRIKALAPEGESQPSTE 830
            :|.:|.  |.|.|...|:...:  :|::.:|......:.::  .:.|||::|      :.:..|:
Human  1357 DGSVEVGIKQLPESESFKLEDM--SQVIGQGMVADQQKALEYPPDNAVSQMK------QQKYPTK 1413

  Fly   831 VDLFISTEKIMVLNTDLKEIMMDHALRTISYIADIGDLVVLMARRRFVPNSVVDPSITSPLGDVP 895
            |. |.|           :||.:..|....|..||........|     |.| |||: |.|:    
Human  1414 VS-FSS-----------QEIPLAPASSYHSTDADFTGYGGFQA-----PLS-VDPA-TCPI---- 1455

  Fly   896 TPG------------------IGEEESP-------PKEPLSKHNRTPKMICHVFESDEAQ--FIA 933
            .||                  :|.:::|       |: ..|:|.....|:.|.....|.|  .:.
Human  1456 VPGQEMIIEISKGRSGLGLSIVGGKDTPLFWRLGSPR-AWSQHLVRAFMLHHPVTEVEGQNAIVI 1519

  Fly   934 QSI---GQAFQVAYM----EFLKANGIENESLAKEMDYQEVLNSQE---------IFGDE----- 977
            ..:   |.|.:...:    :.|:.||::    .:...::|.:.:..         ::.||     
Human  1520 HEVYEEGAAARDGRLWAGDQILEVNGVD----LRNSSHEEAITALRQTPQKVRLVVYRDEAHYRD 1580

  Fly   978 ---LEIFAKKELQKEVVVPKAKGEILGVVIVESGWGSMLPTVVIANLMSSGAAARCGQLNIGDQL 1039
               |||| ..:|||:.      |..||:.||....||   .|.|::::..|||...|:|..|||:
Human  1581 EENLEIF-PVDLQKKA------GRGLGLSIVGKRNGS---GVFISDIVKGGAADLDGRLIQGDQI 1635

  Fly  1040 IAINGMSLVGLPLSTCQSYIRNAKNQTAVKFTVVPCPP-VVEVKI-------------------- 1083
            :::||..:            |||..:|..  |::.|.. :|:::|                    
Human  1636 LSVNGEDM------------RNASQETVA--TILKCAQGLVQLEIGRLRAGSWTSARTTSQNSQG 1686

  Fly  1084 ----------------------------------------LRPKAL-------FQLGFSVQNG-- 1099
                                                    :.|:.:       ..||.|:..|  
Human  1687 SQQSAHSSCHPSFAPVITGLQNLVGTKRVSDPSQKNSGTDMEPRTVEINRELSDALGISIAGGRG 1751

  Fly  1100 --------VICSLLRGGIAER-GGVRVGHRIIEINNQSVVAVPHDTIVKLLSSSVGEILMKTMPT 1155
                    .|..:...|:|.| ..::||.||:.||.|.:..:.|..:|.||.::.|.|:::.:..
Human  1752 SPLGDIPVFIAMIQASGVAARTQKLKVGDRIVSINGQPLDGLSHADVVNLLKNAYGRIILQVVAD 1816

  Fly  1156 SMFRLLTGQ 1164
            :....:..|
Human  1817 TNISAIAAQ 1825

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
X11LNP_001285376.1 PTB_X11 775..954 CDD:269919 44/216 (20%)
PDZ_signaling 988..1065 CDD:238492 23/76 (30%)
PDZ_signaling 1092..1151 CDD:238492 21/69 (30%)
PATJXP_011538764.1 L27_2 8..65 CDD:117611
PDZ_signaling 135..218 CDD:238492
PDZ_signaling 246..325 CDD:238492
PDZ_signaling 366..450 CDD:238492
PDZ_signaling 570..634 CDD:238492
PDZ 683..772 CDD:214570 8/24 (33%)
PDZ_signaling 1066..1157 CDD:238492 16/116 (14%)
PDZ 1236..1321 CDD:214570 18/86 (21%)
PDZ 1459..1574 CDD:214570 15/119 (13%)
PDZ_signaling 1586..1666 CDD:238492 31/103 (30%)
PDZ_signaling 1729..1814 CDD:238492 22/84 (26%)
PDZ_signaling 1852..1936 CDD:238492
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3528
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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