DRSC/TRiP Functional Genomics Resources

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Protein Alignment X11L and cytip

DIOPT Version :9

Sequence 1:NP_001285376.1 Gene:X11L / 252671 FlyBaseID:FBgn0026313 Length:1170 Species:Drosophila melanogaster
Sequence 2:XP_003199223.2 Gene:cytip / 100537036 ZFINID:ZDB-GENE-140106-76 Length:343 Species:Danio rerio


Alignment Length:143 Identity:31/143 - (21%)
Similarity:60/143 - (41%) Gaps:20/143 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly  1042 INGMSLVGLPLSTCQSYIRNAKNQTAVKFTVVPCPPVVEVKILRPKALFQLGFSVQN-GV----- 1100
            :|...:.|..||  ||.:....:.:.|.:|    .|...:.:|..:.....||.||. |:     
Zfish    45 LNTEGMKGRTLS--QSQLARTHSNSLVDYT----DPQRTMVVLEKQDNEVFGFEVQTYGLKVKNT 103

  Fly  1101 --------ICSLLRGGIAERGGVRVGHRIIEINNQSVVAVPHDTIVKLLSSSVGEILMKTMPTSM 1157
                    :|.:..|..||..|:..|..|:.:|..|:....|..|::|:..|...:.::|:..|:
Zfish   104 SMVEMCTFVCRVQDGSAAETAGLTAGDIILSVNGVSIEGSTHQNIIELIRESSNTLKLETVSGSV 168

  Fly  1158 FRLLTGQETPIYI 1170
            .:.:..::...|:
Zfish   169 MKRIELEKKMHYL 181

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
X11LNP_001285376.1 PTB_X11 775..954 CDD:269919
PDZ_signaling 988..1065 CDD:238492 6/22 (27%)
PDZ_signaling 1092..1151 CDD:238492 18/72 (25%)
cytipXP_003199223.2 PDZ_signaling 78..162 CDD:238492 19/83 (23%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3528
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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