DRSC/TRiP Functional Genomics Resources

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Protein Alignment X11L and pdzd3

DIOPT Version :9

Sequence 1:NP_001285376.1 Gene:X11L / 252671 FlyBaseID:FBgn0026313 Length:1170 Species:Drosophila melanogaster
Sequence 2:XP_002935063.2 Gene:pdzd3 / 100489736 XenbaseID:XB-GENE-486153 Length:428 Species:Xenopus tropicalis


Alignment Length:369 Identity:74/369 - (20%)
Similarity:123/369 - (33%) Gaps:114/369 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   863 ADIGDLVVLMARRRFVPNSVVDPSITSPLG-DVPTPGIGEEESPPKEPLSKHNRTPKMIC----- 921
            ::|.|.:||..|..|.|.          || |.|...:||:.....||.::       ||     
 Frog    21 SEIEDDLVLTTRFLFNPK----------LGIDNPALCLGEDTGSDPEPAAR-------ICILRKD 68

  Fly   922 -------HVFESDEAQ--FIAQSI--GQAFQVAYM---EFLKANGIENESLAKEMDYQEVLNSQE 972
                   |:.:..|.:  .:.|.:  |.|:.....   :.|:.||    ....|.:|..|:...:
 Frog    69 ADGDFAFHLSKEQEREGHIVRQVVPGGPAYLAGLRDGDQLLQVNG----EYVHEQEYLRVVQKIK 129

  Fly   973 IFGDELEIFAKKELQKEVV------------------VP-----KAKGEILGVVIVESGWGSMLP 1014
            ..|..|.:....|...|.:                  .|     :.|.|..|.....|..|.:..
 Frog   130 YSGSRLSLGVLDEAAYETLRSSHRSPASVLSNFLSDSCPRPHFYRVKNEGRGFGFTASATGGVRG 194

  Fly  1015 TVVIANLMSSGAAARCGQLNIGDQLIAINGMSLV------------------------------- 1048
            |.:: .:...|.|.:.| :..|.:|:.:||.|.:                               
 Frog   195 TFLL-QVEDGGPAQKAG-VPHGCRLLEVNGESTISITLSQLTKKLQRRSSHVVLLVLEASAWDVY 257

  Fly  1049 ---GLPLSTCQSYIRNAKNQTAVKFTVVPCPPVVEVKILRPKALFQLGFSVQNGVICSLLR---- 1106
               |:|||...:...:...:|. |..:|..|......:.:.|.|...|         ..||    
 Frog   258 ESHGVPLSAALAETSSLPYRTR-KLHLVKGPQGYGFLLRQEKCLAGQG---------QFLREIDP 312

  Fly  1107 GGIAERGGVRVGHRIIEINNQSVVAVPHDTIVKLLSSSVGEILM 1150
            |..||..|:|.|.|::.:|.|||..:.|:..|.::..|..::.:
 Frog   313 GLPAEDAGMREGDRLLGVNGQSVEGLEHEDTVSMIQESGKQVTL 356

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
X11LNP_001285376.1 PTB_X11 775..954 CDD:269919 25/110 (23%)
PDZ_signaling 988..1065 CDD:238492 20/133 (15%)
PDZ_signaling 1092..1151 CDD:238492 17/63 (27%)
pdzd3XP_002935063.2 PDZ_signaling 61..140 CDD:238492 15/89 (17%)
PDZ_signaling 175..249 CDD:238492 14/75 (19%)
PDZ_signaling 278..359 CDD:238492 23/89 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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