DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment X11L and apba2a

DIOPT Version :9

Sequence 1:NP_001285376.1 Gene:X11L / 252671 FlyBaseID:FBgn0026313 Length:1170 Species:Drosophila melanogaster
Sequence 2:XP_021326395.1 Gene:apba2a / 100330365 ZFINID:ZDB-GENE-121107-1 Length:923 Species:Danio rerio


Alignment Length:1039 Identity:336/1039 - (32%)
Similarity:474/1039 - (45%) Gaps:271/1039 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   280 ETRKVLEEF----FKANPEDEKRYTDYTTESGDDVASSQPQEYPATPMEQAYIGQRLARIPKDEL 340
            |||.|..|.    |.|.||..::.      |||       ::.|.  :|:|              
Zfish     8 ETRSVAAELNPPAFSAVPEGREQL------SGD-------RDDPV--LEEA-------------- 43

  Fly   341 YMVHRSPTKKPPSDQNPSTAYQEHNDIELYIDSNSRSSGDLADTELEANLRRHSRNFTLSPETTD 405
                                  ||:.::....|.:.:...|:|...:.::|..|   .|.|::.:
Zfish    44 ----------------------EHDKLDCQTPSPTPAQYSLSDESGDDSIRGES---PLQPDSME 83

  Fly   406 YDS-----NCG--------------------DLDSLSNDIN-CPTDFGKLYTSMPVLEDGLSSGH 444
            .||     |.|                    :.|.::..:: ||.|...:        :||....
Zfish    84 EDSLSEYDNVGSGDEQEEVERDYEEDEELQTEADRMTYYVHCCPEDESYM--------EGLDCHE 140

  Fly   445 ASDTENNVSVVCDKQQSSQSQPVHEHNG----NGERLENDYNVMSASLATLTTDASQSALISDFA 505
            .:|.....|...|.::|.:.:...||:.    .|::.:         .||:.....:....:.|.
Zfish   141 GADGAECPSTSQDVRESCKPKEAWEHSDTSLCKGQQKD---------AATMVYKQPEPITETTFV 196

  Fly   506 SLPM--PPAPPPSSPPQIEIADASESMTMVPDADNPLDSHYGAVYAAALGGTHTEKSAGSGLGVT 568
            ..||  .......:...:|..|:.|.       ||....||....|.........|...|.:   
Zfish   197 QAPMAEDEEDEEETEEDVEEEDSEEE-------DNGGFFHYEGNEAELNNNEIPHKDNCSNV--- 251

  Fly   569 PVTAGGSLPSQAASEI---------------------------QEAMKEIRS------------- 593
             ....|..|.|..|.:                           ::.|:.:|.             
Zfish   252 -CRREGKSPPQEFSRVKVGQESRRSQDNPKYSRDVPLGSNCTQRDRMERVRDKNGSDCPKVSNAP 315

  Fly   594 -ALQRAKTQPEKLKFCDEVLPTDPDSPVWVPRKGTTISTAQGAAADEEPDTDLETDRLLGQQRHD 657
             |.:..|...:..|:....|.|..:..  ...:|.:..|.:|.:||.|       ||...::|| 
Zfish   316 VARESRKDSRQNFKYRGHHLETKNNRE--TAYQGHSAVTIKGKSADAE-------DRGTWKKRH- 370

  Fly   658 EQDFFADQSLADNNANEGTDIASNGHLNGTSDNN-------------NPNPMNNSKPQTYSTATI 709
                ....|..|....:|    :|.|....|..|             ..|..|..|......|.|
Zfish   371 ----LLKYSREDARGGDG----NNSHKRSKSPENCKNRPQDHPICSHKSNGENERKISGNVEARI 427

  Fly   710 RQGIGTSL--TPN-------SPDICQIV----------------------GTTDISISSPEKLQF 743
            ...:.|.|  .||       :||..:.|                      |..:..:.||.| |.
Zfish   428 ENEVKTKLIIAPNNSGRTKVAPDQAKNVKGAPESPRASSASSGKRNSKPRGQANTPVQSPAK-QV 491

  Fly   744 TKSPTGSIKSLKDSANSDKKAKSRNKE---------------------------GLLEPKVLIEG 781
            .|.....::..|...|.::.::|.:::                           |..||:.||.|
Zfish   492 NKDSAKPVEEEKTRPNEEQVSQSASQDSSTGPPSGQNRPQTQRNPSFPSFVDIPGPCEPEDLING 556

  Fly   782 VLFRARYLGSTQLVCEGQPTKSTRMMQAEEAVSRIKALAPEGESQPSTEVDLFISTEKIMVLNTD 846
            ::|.|.|||||||:.:..|:||.||.||:|||..:||:  |.|:|..||:||||||:.|.|||.|
Zfish   557 IIFAANYLGSTQLLSDRNPSKSVRMKQAQEAVDCVKAV--EVETQSLTEIDLFISTKAIKVLNAD 619

  Fly   847 LKEIMMDHALRTISYIADIGDLVVLMARRRFVPNSVVDPSITSPLGDVPTPGIGEEESPPKEPLS 911
            .:|.|||:||||||||||||::||||||||...:|:          |....|:..:         
Zfish   620 TQETMMDNALRTISYIADIGNVVVLMARRRLSNSSL----------DCTESGLNSD--------- 665

  Fly   912 KHNRTPKMICHVFESDEAQFIAQSIGQAFQVAYMEFLKANGIENESLAKEMDYQEVLNSQEIFGD 976
            .:::..:|||:||||::||.|||||||||.:||.|||:||||..:.|::: ||.::||:||::.|
Zfish   666 ANHKQYRMICYVFESEDAQLIAQSIGQAFSMAYQEFLRANGINPKDLSQK-DYSDILNTQEMYND 729

  Fly   977 ELEIFAKKELQKEVVVPKAKGEILGVVIVESGWGSMLPTVVIANLMSSGAAARCGQLNIGDQLIA 1041
            :|..|:..:..|::.:.|.||||||||||||||||:||||::|.::::|.|||.|:||:|||::|
Zfish   730 DLVHFSNSDNCKQLHLEKQKGEILGVVIVESGWGSILPTVILACMLNNGPAARSGKLNVGDQIMA 794

  Fly  1042 INGMSLVGLPLSTCQSYIRNAKNQTAVKFTVVPCPPVVEVKILRPKALFQLGFSVQNGVICSLLR 1106
            :|..|||||||:.||..|:..||...||.:||.||||..|.|.||...:|||||||||:||||:|
Zfish   795 VNDTSLVGLPLAACQGIIKALKNHVQVKLSVVSCPPVTTVLIKRPDLQYQLGFSVQNGIICSLMR 859

  Fly  1107 GGIAERGGVRVGHRIIEINNQSVVAVPHDTIVKLLSSSVGEILMKTMPTSMFRLLTGQETPIYI 1170
            |||||||||||||||||||.|||||:.|:.||..||.|||||.|||||..|||||||||||:|:
Zfish   860 GGIAERGGVRVGHRIIEINGQSVVAMAHEKIVHALSVSVGEINMKTMPAVMFRLLTGQETPVYM 923

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
X11LNP_001285376.1 PTB_X11 775..954 CDD:269919 94/178 (53%)
PDZ_signaling 988..1065 CDD:238492 46/76 (61%)
PDZ_signaling 1092..1151 CDD:238492 47/58 (81%)
apba2aXP_021326395.1 CBF <21..114 CDD:332044 23/146 (16%)
PTB_X11 550..709 CDD:269919 95/179 (53%)
PDZ 742..823 CDD:278991 47/80 (59%)
PDZ_signaling 831..904 CDD:238492 53/72 (74%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 175 1.000 Domainoid score I3583
eggNOG 1 0.900 - - E1_KOG3605
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 530 1.000 Inparanoid score I1184
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm6563
orthoMCL 1 0.900 - - OOG6_104247
Panther 1 1.100 - - O PTHR12345
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1305
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
109.860

Return to query results.
Submit another query.