DRSC/TRiP Functional Genomics Resources

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Protein Alignment X11L and apba1a

DIOPT Version :9

Sequence 1:NP_001285376.1 Gene:X11L / 252671 FlyBaseID:FBgn0026313 Length:1170 Species:Drosophila melanogaster
Sequence 2:XP_001343372.1 Gene:apba1a / 100003938 ZFINID:ZDB-GENE-060526-175 Length:968 Species:Danio rerio


Alignment Length:1154 Identity:378/1154 - (32%)
Similarity:526/1154 - (45%) Gaps:299/1154 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    90 GSGSYGSNAGRDSGSYYYQRPQLHQ--IRLGRSPGSQFETRDVLPQGLASPGSPTDVGKADGQCL 152
            |.||..||..|:.|:........||  .|..|..||...|...     .:...|.:.|.|:.|.:
Zfish    41 GDGSSRSNRSRNHGTENNHHQSQHQGAPRYRRCEGSNGGTNRT-----HAARRPEEEGDAEQQTI 100

  Fly   153 RDGEIVVFDDIDTNWMNKASSGQRPGSNEDVLKVTKMIGQLPIAEYEGSPRRFGSQPNTNTITMG 217
            :       ..|....:.:.   :|.|.||..|:          |:.:...:|...|.:...    
Zfish   101 Q-------QPIPRPAVTRY---RRQGDNEARLR----------AQQQRQRQRERQQRDAER---- 141

  Fly   218 GPRKRPPGFPQRVSPT-TSVANNATAAAKASVGNLIDLVDHEEERSGTLREKTPTFDYLYEFSET 281
            ..:.|.....|.:||| |.:.......|:          :.|.:.|..|.....|....:..::.
Zfish   142 AEQHRLEQQQQLLSPTQTMLPTREPEEAE----------EDEGDGSSALARSASTESGFHNHTDR 196

  Fly   282 RK-----VLEEFFKANPEDEKRY-------TDYTTESGDDVASSQPQEYPATPMEQAYIGQRLAR 334
            .:     |||    |.||||..|       .:..|||.:   |.|....||              
Zfish   197 AEGDAVMVLE----AEPEDENTYGIPLRPEAEEYTESAE---SEQQHGGPA-------------- 240

  Fly   335 IPKDELYMVHRSPTKKPPSDQNPSTAYQEHNDIELYIDSNSRSSGDLADTELEANLRRHSRNFTL 399
                  |:..:.|.:.||..:.|...                     |:..|||.        ||
Zfish   241 ------YLQPQYPPQPPPLPREPLPN---------------------AERPLEAE--------TL 270

  Fly   400 SPETTDYDSNCGDLDSLSNDINCPTDFGKLYTSMPVLEDGLSSGHASDT--ENNVSVVCDK---- 458
            :|   :|.|.........|    ||:.|:.:......::..|..:...|  |:....:.|.    
Zfish   271 NP---NYSSYVYTQPMYHN----PTEAGEAHEGGATEDEQYSEPYVDYTLQEHVYEEITDAPLSR 328

  Fly   459 ---QQSSQSQP---------VHEHNGNGERLENDYNVMSASLATLTTDASQSALISDFASLPMPP 511
               |...|.:|         ..:....|.||.: |:..|..    .:|:.:..  ::||  |.|.
Zfish   329 AEGQTPQQQRPEFRLFERDLYQQQEAVGSRLHH-YDERSDG----ESDSPEKE--AEFA--PYPR 384

  Fly   512 APPPSSPPQIE--IADASES----------MTMVPDADNPLD-----SHYGAVYAAALGGTHTEK 559
            |........|:  :|:..||          |.:..|.|...|     ||          |...:.
Zfish   385 ADSCEQDEDIDQIVAEVKESLSSQSLDRIAMGLNKDGDKEEDWPESESH----------GQLNDN 439

  Fly   560 SAGSGLGVTPVTAGGSLPSQAASE--------------IQEAMKEIRSALQRAKTQPEKLKFCDE 610
            :.     :.||:. |.||...:.:              |..|:|:|:.|::..||:..:..:   
Zfish   440 NP-----LEPVSE-GELPRSPSEDQAPVIRSSREKRDAISLAIKDIKEAIEEVKTRTVRSPY--- 495

  Fly   611 VLPTDPDSPVWVPRKGTTISTAQGAAADEEPDTDLETDRLLGQQRHDEQDFFADQSLADNNANEG 675
             .|.:|..|:||.|:            |..|..:.:....||          ||...:.:.:.:|
Zfish   496 -TPDEPKEPIWVMRQ------------DLSPTAESDLQPSLG----------ADSPGSGSTSPQG 537

  Fly   676 TDIASNGHLNGTSDNNNPNPMNNSKPQTYSTATIRQGIGTSLTPNSPDICQIVGTTDISISSPEK 740
            .:.:|:..::....::..:|....|....|.|:.            |...::.|..|        
Zfish   538 AESSSHQMMSQEGSDSFESPSPAGKESRRSLASF------------PTYVEVPGPCD-------- 582

  Fly   741 LQFTKSPTGSIKSLKDSANSDKKAKSRNKEGLLEPKVLIEGVLFRARYLGSTQLVCEGQPTKSTR 805
                                              |:.||:|::|.|.|||||||:.:..|:|:.|
Zfish   583 ----------------------------------PEDLIDGIIFAANYLGSTQLLSDKTPSKNVR 613

  Fly   806 MMQAEEAVSRIKAL---------APEGESQPSTEVDLFISTEKIMVLNTDLKEIMMDHALRTISY 861
            ||||:|||||||..         ||||::||.|||||||||::|.|||.|.:|.||||.||||||
Zfish   614 MMQAQEAVSRIKTAQKLAKNKKKAPEGDAQPMTEVDLFISTQRIKVLNADSQETMMDHPLRTISY 678

  Fly   862 IADIGDLVVLMARRRFVPNSVVDPSITSPLGDVPTPGIGEEESPPKEPLSKHNRTPKMICHVFES 926
            |||||::||||||||.            |..|      .:|.....:|.....|..|||||||||
Zfish   679 IADIGNIVVLMARRRM------------PRSD------SQENMEASDPAQDEKRQYKMICHVFES 725

  Fly   927 DEAQFIAQSIGQAFQVAYMEFLKANGIENESLAKEMDYQEVLNSQEIFGDELEIFAKKELQKEVV 991
            ::||.|||||||||.|||.|||:||||..|.|::: :|.::||:|:::.|:|..|:|.|..|:|.
Zfish   726 EDAQLIAQSIGQAFSVAYQEFLRANGINPEDLSQK-EYSDLLNTQDMYNDDLIHFSKSENCKDVY 789

  Fly   992 VPKAKGEILGVVIVESGWGSMLPTVVIANLMSSGAAARCGQLNIGDQLIAINGMSLVGLPLSTCQ 1056
            :.|.||||||:|||||||||:||||:|||:|..|.|.:.|:||||||:::|||.|||||||||||
Zfish   790 IEKQKGEILGLVIVESGWGSILPTVIIANMMHGGPAEKSGRLNIGDQIMSINGTSLVGLPLSTCQ 854

  Fly  1057 SYIRNAKNQTAVKFTVVPCPPVVEVKILRPKALFQLGFSVQNGVICSLLRGGIAERGGVRVGHRI 1121
            |.|:..|||:.:|..:|.||||..|.|.||...:|||||||||:||||:||||||||||||||||
Zfish   855 SIIKGLKNQSRIKLNIVRCPPVTTVLIRRPDLRYQLGFSVQNGIICSLMRGGIAERGGVRVGHRI 919

  Fly  1122 IEINNQSVVAVPHDTIVKLLSSSVGEILMKTMPTSMFRLLTGQETPIYI 1170
            ||||:|||||.||:.||.:||::||||.|||||.:|:||||.||.|:||
Zfish   920 IEINSQSVVATPHEKIVHILSNAVGEIHMKTMPAAMYRLLTAQEQPVYI 968

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
X11LNP_001285376.1 PTB_X11 775..954 CDD:269919 105/187 (56%)
PDZ_signaling 988..1065 CDD:238492 52/76 (68%)
PDZ_signaling 1092..1151 CDD:238492 47/58 (81%)
apba1aXP_001343372.1 PTB_X11 583..754 CDD:269919 106/188 (56%)
PDZ 787..870 CDD:278991 54/82 (66%)
PDZ_signaling 876..949 CDD:238492 53/72 (74%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 175 1.000 Domainoid score I3583
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 530 1.000 Inparanoid score I1184
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm6563
orthoMCL 1 0.900 - - OOG6_104247
Panther 1 1.100 - - O PTHR12345
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1305
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
98.960

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