DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gstt1 and GstD6

DIOPT Version :9

Sequence 1:NP_445745.1 Gene:Gstt1 / 25260 RGDID:2765 Length:240 Species:Rattus norvegicus
Sequence 2:NP_524915.1 Gene:GstD6 / 48339 FlyBaseID:FBgn0010042 Length:215 Species:Drosophila melanogaster


Alignment Length:205 Identity:56/205 - (27%)
Similarity:93/205 - (45%) Gaps:26/205 - (12%)


- Green bases have known domain annotations that are detailed below.


  Rat     3 LELYLDLLSQPCRAIYIFAKKNNIPFQMHTVELRKGEHLSDAFAQVNPMKKVPAMKDGGFTLCES 67
            ::||....|...||:.:.||...:.|....|....||.|...|.::||...:|.:.|..|.:.|:
  Fly     1 MDLYNMSGSPSTRAVMMTAKAVGVEFNSIQVNTFVGEQLEPWFVKINPQHTIPTLVDNLFVIWET 65

  Rat    68 VAILLYLAHKYKVPDHWYPQDLQARARVDEYLAWQHTTLRRSCLRTLWHKVMFPVF-LGEQIRPE 131
            .||::||..:|...|..||:|.|.:|.:::.|.:...||.....     |..||:. .|:....|
  Fly    66 RAIVVYLVEQYGKDDSLYPKDPQKQALINQRLYFDMGTLYDGIA-----KYFFPLLRTGKPGTQE 125

  Rat   132 MLAATLADLDVNVQVLEDQFLQDKDFLVGPHISLADVVAI-----TELMHPVGGGCPVFEGR--P 189
            .|....|..|     |.:.||..:|::.|..:|:||:|.:     ||::.        |:.:  |
  Fly   126 NLEKLNAAFD-----LLNNFLDGQDYVAGNQLSVADIVILATVSTTEMVD--------FDLKKFP 177

  Rat   190 RLAAWYRRVE 199
            .:..||:..:
  Fly   178 NVDRWYKNAQ 187

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
Gstt1NP_445745.1 GST_N_Theta 3..78 CDD:239348 23/74 (31%)