DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gstt1 and gfzf

DIOPT Version :9

Sequence 1:NP_445745.1 Gene:Gstt1 / 25260 RGDID:2765 Length:240 Species:Rattus norvegicus
Sequence 2:NP_001014610.1 Gene:gfzf / 40858 FlyBaseID:FBgn0250732 Length:1045 Species:Drosophila melanogaster


Alignment Length:182 Identity:50/182 - (27%)
Similarity:83/182 - (45%) Gaps:31/182 - (17%)


- Green bases have known domain annotations that are detailed below.


  Rat     3 LELYLDLLSQPCRAIYIFAKKNNIPFQMHTVELRKGEHLSDAFAQVNPMKKVPAMKDGGFTLCES 67
            ::||......|..|:.:..|..:|.:|:..|:....||.|:.::::||.|::|.:.|.||.|.||
  Fly   812 MKLYAVSDGPPSLAVRMTLKALDIQYQLINVDFCAMEHRSEEYSKMNPQKEIPVLDDDGFYLSES 876

  Rat    68 VAILLYLAHKYKVPDHWYPQDLQARARVDEYLAWQ----------HTTLRRSCLRTLWHKVMFPV 122
            :||:.||..||......||||:..||.:::.|.:.          |:              |.|:
  Fly   877 IAIMQYLCDKYAPDSTLYPQDVNVRAVINQRLCFNMGFYYAPISAHS--------------MAPI 927

  Rat   123 FLGEQIRPEMLAATLADLDVNVQVLEDQFLQ--DKDFLVGPHISLADVVAIT 172
            |...:..|..|......|||     .:.:||  ...:..|.:|::||...|:
  Fly   928 FFDYKRTPMSLKKVQNALDV-----FETYLQRLGTKYAAGENITIADFALIS 974

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
Gstt1NP_445745.1 GST_N_Theta 3..78 CDD:239348 25/74 (34%)