DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gstt1 and GstE12

DIOPT Version :9

Sequence 1:NP_445745.1 Gene:Gstt1 / 25260 RGDID:2765 Length:240 Species:Rattus norvegicus
Sequence 2:NP_001246500.1 Gene:GstE12 / 37960 FlyBaseID:FBgn0027590 Length:223 Species:Drosophila melanogaster


Alignment Length:204 Identity:61/204 - (29%)
Similarity:100/204 - (49%) Gaps:27/204 - (13%)


- Green bases have known domain annotations that are detailed below.


  Rat     5 LYLDLLSQPCRAIYIFAKKNNIPFQMHTVELRKGEHLSDAFAQVNPMKKVPAMKDGGFTLCESVA 69
            ||...||.|.||:.:.||...:..::..:.|.|||||:..|.::||...:|.:.||..|:.:|.|
  Fly     6 LYYATLSPPSRAVLLTAKAIGLDLELRPINLLKGEHLTPEFLKLNPQHTIPTLIDGEATIIDSHA 70

  Rat    70 ILLYLAHKY-KVPDHWYPQDLQARARVDE--YLAWQHTTLRRSCLRTLWHKVMFPVFLGEQIRPE 131
            |..||..|| :.....||::|..||.||.  :|...|...|   ||.|:..:::           
  Fly    71 ICAYLVEKYGQKEQQLYPKELVQRANVDARLHLDSGHLFAR---LRFLYEPILY----------- 121

  Rat   132 MLAATLADLDVNV------QVLEDQFLQDKDFLVGPHISLADVVAITELMHPVGGGCPVFEGR-P 189
             ..:|...:|...      ::||. ||:|:.:|.|..:::||..|:..:. .|....|:.|.: |
  Fly   122 -YGSTDCSIDKIAYIQKCWEILEG-FLKDQPYLCGSDLTIADFCAVATVT-SVNDTAPIDEFKFP 183

  Rat   190 RLAAWYRRV 198
            ::.||.:|:
  Fly   184 KMHAWLKRL 192

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
Gstt1NP_445745.1 GST_N_Theta 3..78 CDD:239348 27/72 (38%)