DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gstt1 and GstE4

DIOPT Version :9

Sequence 1:NP_445745.1 Gene:Gstt1 / 25260 RGDID:2765 Length:240 Species:Rattus norvegicus
Sequence 2:NP_611326.1 Gene:GstE4 / 37109 FlyBaseID:FBgn0063496 Length:222 Species:Drosophila melanogaster


Alignment Length:216 Identity:70/216 - (32%)
Similarity:107/216 - (49%) Gaps:29/216 - (13%)


- Green bases have known domain annotations that are detailed below.


  Rat     3 LELY-LDLLSQPCRAIYIFAKKNNIPFQMHTVELRKGEHLSDAFAQVNPMKKVPAMKDGGFTLCE 66
            :.|| || .|.|.||..:..|..::||:...|.|.:.|:.|:.|::.||...||.::|....:.:
  Fly     4 ISLYGLD-ASPPTRACLLTLKALDLPFEFVFVNLFEKENFSEDFSKKNPQHTVPLLQDDDACIWD 67

  Rat    67 SVAILLYLAHKYKVPDHWYPQDLQARARVDEYLAWQHTTLRRSCLRTLWHKVMFPVFLGEQIRPE 131
            |.||:.||..||...|..||:||..||:||:.:.::...:..|.||.|...|:   |.||...|.
  Fly    68 SHAIMAYLVEKYAPSDELYPKDLLQRAKVDQLMHFESGVIFESALRRLTRPVL---FFGEPTLPR 129

  Rat   132 MLAATLADLDVNVQVLE--DQFLQDKDFLVGPHISLADVVAITELMHPVGGGCPVF-----EGRP 189
                  ..:|..:||.:  :.||.|.||:.|..:::|| .:|...:..:|    ||     ...|
  Fly   130 ------NQVDHILQVYDFVETFLDDHDFVAGDQLTIAD-FSIVSTITSIG----VFLELDPAKYP 183

  Rat   190 RLAAWYRRV------EAAVGK 204
            ::|||..|:      |.|.||
  Fly   184 KIAAWLERLKELPYYEEANGK 204

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
Gstt1NP_445745.1 GST_N_Theta 3..78 CDD:239348 26/75 (35%)