DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gstt1 and GstT1

DIOPT Version :9

Sequence 1:NP_445745.1 Gene:Gstt1 / 25260 RGDID:2765 Length:240 Species:Rattus norvegicus
Sequence 2:NP_610509.2 Gene:GstT1 / 35995 FlyBaseID:FBgn0050000 Length:228 Species:Drosophila melanogaster


Alignment Length:219 Identity:83/219 - (37%)
Similarity:122/219 - (55%) Gaps:10/219 - (4%)


- Green bases have known domain annotations that are detailed below.


  Rat     3 LELYLDLLSQPCRAIYIFAKKNNIPFQMHTVELRKGEHLSDAFAQVNPMKKVPAMKDGGFTLCES 67
            ::.|.|.||||.||::|..|....||:...|.|||.|.|:|.:..:|..:||||:.||.|.|.||
  Fly     5 IKYYYDFLSQPSRALWIAMKLGKTPFEDCPVALRKQEQLTDEYRSINRFQKVPAIVDGKFQLGES 69

  Rat    68 VAILLYLAHKYKVPDHWYPQDLQARARVDEYLAWQHTTLRRSC---LRTLWHKVMFPV-FLGEQI 128
            |:|:.|||.|....:..||:.|:.||||||:|.|||..:|..|   .|.:|   :.|. .|....
  Fly    70 VSIVRYLADKGVFSEQLYPKTLEERARVDEFLEWQHFNVRLVCSLFFRQVW---LLPAKGLAPAP 131

  Rat   129 RPEMLAATLADLDVNVQVLEDQFLQDKDFLVGPHISLADVVAITELMHPVGGGCPVFEGR-PRLA 192
            :||.:...:.|::.|:.:||..:| :||||||..:::||:...:|:.........|.|.: |::|
  Fly   132 KPESVKKLIKDVESNLGLLERLWL-EKDFLVGDKLTVADIFGSSEINQMKLCQYNVNEKQFPKVA 195

  Rat   193 AWYRRVEAAVGKDLFLEAHEVILK 216
            .|..||..|. ...:.|||..:.|
  Fly   196 KWMERVRDAT-NPYYDEAHSFVYK 218

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
Gstt1NP_445745.1 GST_N_Theta 3..78 CDD:239348 35/74 (47%)