DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Gstt1 and GstT3

DIOPT Version :9

Sequence 1:NP_445745.1 Gene:Gstt1 / 25260 RGDID:2765 Length:240 Species:Rattus norvegicus
Sequence 2:NP_001162808.1 Gene:GstT3 / 33047 FlyBaseID:FBgn0031117 Length:268 Species:Drosophila melanogaster


Alignment Length:224 Identity:80/224 - (35%)
Similarity:128/224 - (57%) Gaps:8/224 - (3%)


- Green bases have known domain annotations that are detailed below.


  Rat     3 LELYLDLLSQPCRAIYIFAKKNNIPFQMHTVELRKGEHLSDAF-AQVNPMKKVPAMKDGGFTLCE 66
            :..|.||:|||.||::|..:.:|:||:...|.||.||||::.| .::|..::||.:.|.|:.|.|
  Fly    45 IRYYYDLMSQPSRALFIIFRLSNMPFEDCVVALRNGEHLTEDFKKEINRFQRVPCIHDNGYKLAE 109

  Rat    67 SVAILLYLAHKYKVPDHWYPQDLQARARVDEYLAWQHTTLRRSC---LRTLWHKVMFPVFLGEQI 128
            |||||.||:.|.|:|:|.||:....::||||:|.|||.:||.:|   .||:|   :.|:..|...
  Fly   110 SVAILRYLSAKGKIPEHLYPKYFVDQSRVDEFLEWQHMSLRLTCAMYFRTVW---LEPLLTGRTP 171

  Rat   129 RPEMLAATLADLDVNVQVLEDQFLQDKDFLVGPHISLADVVAITELMHPVGGGCPVFEGRPRLAA 193
            ....:......::.|:.|:|:.:|:.||||.|..:::||:.|..|:.........|....|::.|
  Fly   172 SEAKIETFRMQMERNLDVVEEVWLEGKDFLTGSSLTVADIFAACEIEQTRMADYDVRIKYPKIRA 236

  Rat   194 WYRRVEAAVGKDLFLEAHEVILKVRDCPP 222
            |.:||..:. ...:..|||.:.|:....|
  Fly   237 WLKRVRQSC-NPYYDVAHEFVYKISGTGP 264

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
Gstt1NP_445745.1 GST_N_Theta 3..78 CDD:239348 34/75 (45%)