DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gp5 and CG4950

DIOPT Version :9

Sequence 1:NP_036927.2 Gene:Gp5 / 25259 RGDID:2724 Length:567 Species:Rattus norvegicus
Sequence 2:NP_001261934.1 Gene:CG4950 / 39783 FlyBaseID:FBgn0036587 Length:574 Species:Drosophila melanogaster


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gp5NP_036927.2 LRR_8 <64..110 CDD:404697
LRR 1 75..96
leucine-rich repeat 76..99 CDD:275380
LRR 2 99..120
leucine-rich repeat 100..123 CDD:275380
PRK15370 <103..>422 CDD:185268
LRR 3 123..144
leucine-rich repeat 124..147 CDD:275380
LRR 4 147..168
leucine-rich repeat 148..171 CDD:275380
LRR 5 171..193
leucine-rich repeat 172..195 CDD:275380
LRR 6 195..216
leucine-rich repeat 196..219 CDD:275380
LRR 7 219..240
leucine-rich repeat 220..243 CDD:275380
LRR 8 243..264
leucine-rich repeat 244..267 CDD:275380
LRR 9 267..288
leucine-rich repeat 268..291 CDD:275380
LRR 10 291..312
leucine-rich repeat 292..315 CDD:275380
LRR 11 315..337
leucine-rich repeat 316..338 CDD:275380
LRR 12 340..361
leucine-rich repeat 341..364 CDD:275380
LRR 13 364..385
leucine-rich repeat 365..388 CDD:275380
LRR 14 388..409
leucine-rich repeat 389..410 CDD:275380
PCC 394..>458 CDD:188093
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 474..499
CG4950NP_001261934.1 leucine-rich repeat 96..119 CDD:275380
LRR_8 118..178 CDD:290566
leucine-rich repeat 120..143 CDD:275380
leucine-rich repeat 144..167 CDD:275380
leucine-rich repeat 168..191 CDD:275380
LRR_8 192..250 CDD:290566
leucine-rich repeat 192..215 CDD:275380
LRR_RI <207..432 CDD:238064
leucine-rich repeat 216..239 CDD:275380
leucine-rich repeat 240..299 CDD:275380
LRR_8 299..356 CDD:290566
leucine-rich repeat 300..321 CDD:275380
leucine-rich repeat 322..345 CDD:275380
LRR_8 344..405 CDD:290566
leucine-rich repeat 346..365 CDD:275380
leucine-rich repeat 370..394 CDD:275380
leucine-rich repeat 395..420 CDD:275380
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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