DRSC/TRiP Functional Genomics Resources

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Protein Alignment DIP2 and PCS60

DIOPT Version :9

Sequence 1:NP_612019.2 Gene:DIP2 / 252479 FlyBaseID:FBgn0024806 Length:1773 Species:Drosophila melanogaster
Sequence 2:NP_009781.3 Gene:PCS60 / 852523 SGDID:S000000426 Length:543 Species:Saccharomyces cerevisiae


Alignment Length:658 Identity:132/658 - (20%)
Similarity:221/658 - (33%) Gaps:214/658 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   458 TNSFK-----SPMATVLDPNGKVTTTLTYGKLLSRAQKIAHALSTKIFSKGPEQVTLKPGDRVAL 517
            |.||.     |....|:.|  :..|.:||..|   :..:.|..:.......|....:...|.||:
Yeast     8 TASFNDTFSVSDNVAVIVP--ETDTQVTYRDL---SHMVGHFQTMFTNPNSPLYGAVFRQDTVAI 67

  Fly   518 VYPNNDPLSFITAWYGCMFRGLVPLPIELPLSSSDTPPQQVGFLLSSCGITVALTSEA-CLKGLP 581
            ...|.  |.||.|:.|......:..|:     :.:...::..|.|:.      |.|:| |   :|
Yeast    68 SMRNG--LEFIVAFLGATMDAKIGAPL-----NPNYKEKEFNFYLND------LKSKAIC---VP 116

  Fly   582 KSTT---TGEIAKLKGWPRLQWFVTEHLPKPPKEFNVGNLRADDSAAAYIEY----TTDKEGSVM 639
            |.||   :.||  ||.......|:.|              .|.|:....:||    ..|....|:
Yeast   117 KGTTKLQSSEI--LKSASTFGCFIVE--------------LAFDATRFRVEYDIYSPEDNYKRVI 165

  Fly   640 GVTVTRAAMIN--------HCRALTMA-CHYTEGETIVCVLDFKREVGLWH-SVLTSVLNGMHVI 694
            ..::..|..:|        ..|:..:| ..:|.|.|     ...:.|.|.| :::.|.||    |
Yeast   166 YRSLNNAKFVNTNPVKFPGFARSSDVALILHTSGTT-----STPKTVPLLHLNIVRSTLN----I 221

  Fly   695 FIPYALMKL-RPSSWMQLITKHRASCCLVKSRDLHWGLLATKDHKDISLSSLR---MLLVADGAN 755
            ...|.|..| |....|.|...|              ||:.      :.||:.|   .::|.||.:
Yeast   222 ANTYKLTPLDRSYVVMPLFHVH--------------GLIG------VLLSTFRTQGSVVVPDGFH 266

  Fly   756 P---WSLSSCDQFLSVFQAKGLRSDAIC---PCASSSEVFTVSLRRPGR-------GSC--GFSP 805
            |   |     |||:..          .|   .|..:..:..:::.:|..       .||  ..:|
Yeast   267 PKLFW-----DQFVKY----------NCNWFSCVPTISMIMLNMPKPNPFPHIRFIRSCSSALAP 316

  Fly   806 SATGR-------GVLSMAALSHGVVRVDSEDSLTSLTL----QDCGQV-MPAAQMVVVRSEGPPV 858
            :...:       .||...|::      ::...:||..|    :..|.| .|....||:..:...|
Yeast   317 ATFHKLEKEFNAPVLEAYAMT------EASHQMTSNNLPPGKRKPGTVGQPQGVTVVILDDNDNV 375

  Fly   859 LCKTDQVGEICVTSGSTSASYFGLDGMTNSTFKVQPLLEELEQPKDGNGTVNIISKPIGEDF--- 920
            | ...:|||:.:...:.:..|                   ...||...           |:|   
Yeast   376 L-PPGKVGEVSIRGENVTLGY-------------------ANNPKANK-----------ENFTKR 409

  Fly   921 --YVRSGLLGFLGPGGLVFVCGSRDGLMTVTGRKHNADDIIATVLA----VEPMRF-----IYRG 974
              |.|:|..|:..|.|.:.:.|....|:...|.|.:..::...:|:    .|.:.|     :| |
Yeast   410 ENYFRTGDQGYFDPEGFLVLTGRIKELINRGGEKISPIELDGIMLSHPKIDEAVAFGVPDDMY-G 473

  Fly   975 RIAVFSIKVLRDERVCVIAEQRPDCSEEESFQWMSRVLQAVDSIHQVGIYCLALVPP-----NHL 1034
            ::...:|.:.:.|::          :.||...::.:.|.:..            :|.     :.|
Yeast   474 QVVQAAIVLKKGEKM----------TYEELVNFLKKHLASFK------------IPTKVYFVDKL 516

  Fly  1035 PKTPLGGI 1042
            |||..|.|
Yeast   517 PKTATGKI 524

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DIP2NP_612019.2 DMAP_binding 3..115 CDD:283995
ARG80 33..369 CDD:227400
PRK09192 470..1061 CDD:236403 127/641 (20%)
Dip2 470..1054 CDD:213273 127/641 (20%)
AMP-binding 1142..1587 CDD:278902
AFD_class_I 1159..1762 CDD:302604
PCS60NP_009781.3 FACL_fum10p_like 18..531 CDD:341249 129/648 (20%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0318
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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