DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment DIP2 and acs-16

DIOPT Version :9

Sequence 1:NP_612019.2 Gene:DIP2 / 252479 FlyBaseID:FBgn0024806 Length:1773 Species:Drosophila melanogaster
Sequence 2:NP_490859.1 Gene:acs-16 / 171714 WormBaseID:WBGene00018579 Length:569 Species:Caenorhabditis elegans


Alignment Length:515 Identity:98/515 - (19%)
Similarity:191/515 - (37%) Gaps:146/515 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly  1130 DCERKPQLITGVLRWRANTSPDHIIFTLLNSKGAIAKTLTCSELHKRAEKIAALLQERGRIEPGD 1194
            |.:..||||      ...:..|.:.....:.|    .:||.|::....|.:||.....| ::.||
 Worm    32 DSQTIPQLI------YTKSEMDRVAAVFDSEK----LSLTFSKIVSEMESLAAGFLSIG-LKQGD 85

  Fly  1195 HVALIFPPGLD----LLCAFYGCLYLGAIPITIRPPHPQNLNTTLPTVRMIVDVSK--------- 1246
            .|.:   .|.:    :|||. .|...|.:.....|.:|.:.     :::..:::.:         
 Worm    86 RVLV---AGSNHSQVMLCAL-ACSRAGLVFSLANPNYPNSY-----SLKRALELGEFQCIVCFRA 141

  Fly  1247 --------SGIVLSIQPIIKLLKSR--EAATSIDPKTWPPILDIDDNPKRKYAGIATVS---FDS 1298
                    :.::|.|.|  :|::||  :..:.:.||....||..:|:   |:||..|:|   ..|
 Worm   142 HQYEADHLNNLLLEIAP--ELMRSRKGQLKSELLPKLTHVILAEEDH---KHAGTFTLSEVFLKS 201

  Fly  1299 S------------------AYLDFSVSTCGRLSGVNITHRSLSSLCASLKLACELYPSRHVALCL 1345
            |                  |.|.|::.|.|....:.::|..:.:...::..|..: ..:||..|.
 Worm   202 SKEKIAKLPDFSKWSSHKLACLQFTLGTTGAPKLIALSHYQMLNGARAVAAAFGI-NDKHVLACA 265

  Fly  1346 DPYCGLGFVMWTLIGVYSGHHSILIAPYEVEAN---------PSLWLSTLSQHRVRDTFCSYGVI 1401
            .|...:..           .:.|.::|:..|..         |....|::|::|           
 Worm   266 LPIFRIAI-----------FNLICLSPFLTECRIIFPDATPLPKNLFSSVSKYR----------- 308

  Fly  1402 ELCTKALSNSIP-------SLKQRNIDLRCVRTCVVVAEERPRVQLTQQFCKLFQALGLNTRCVS 1459
              ||..|||...       |..|| :.|..:...:::.:     :::::..||.:....|.:.::
 Worm   309 --CTTLLSNGAALRLLLKISQTQR-VKLSALENILLIGD-----RVSKEVLKLIKVQAENVKIIA 365

  Fly  1460 TSFGCRVNPAICVQGASSAESAQVYVDMRALRNNRVALVE-RGAPNSLCVIESGKLLPGVKVIIA 1523
            ..:......:|.:.|..:::..:..  .:|:......|:. .|:.|.:...:.||||  ::|...
 Worm   366 VGYLLTETGSIPLMGDQNSDFTRNV--GKAIAGYEAHLIPLDGSENQVETGKLGKLL--IRVYYG 426

  Fly  1524 N------PETKGHCGDSHLGEIWVQAPH----NANGYFTIYGDETD--YN------DHFN 1565
            :      |:|||.       |.||....    :.||...:...|.|  |:      :|:|
 Worm   427 STFMGYAPDTKGK-------EKWVDTGDIGRMDENGAIEVVASEDDLIYDKNNCLVEHWN 479

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DIP2NP_612019.2 DMAP_binding 3..115 CDD:283995
ARG80 33..369 CDD:227400
PRK09192 470..1061 CDD:236403
Dip2 470..1054 CDD:213273
AMP-binding 1142..1587 CDD:278902 93/503 (18%)
AFD_class_I 1159..1762 CDD:302604 92/486 (19%)
acs-16NP_490859.1 CaiC 35..565 CDD:223395 97/512 (19%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0318
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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