DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Arsb and CG7402

DIOPT Version :9

Sequence 1:NP_254278.1 Gene:Arsb / 25227 RGDID:2158 Length:528 Species:Rattus norvegicus
Sequence 2:NP_649023.1 Gene:CG7402 / 39994 FlyBaseID:FBgn0036768 Length:579 Species:Drosophila melanogaster


Alignment Length:556 Identity:206/556 - (37%)
Similarity:300/556 - (53%) Gaps:64/556 - (11%)


- Green bases have known domain annotations that are detailed below.


  Rat    22 LLLLL----LLWPARASDAAPPPHVVFVLADDLGWNDLGFHGS-VIRTPHLDALAAGGVVLDNYY 81
            :|:||    :|..|..|..:..|::|.:|.||:|.||:.|||| .|.||::||||..|::|:.:|
  Fly     6 ILVLLVVSSILSLAYGSGYSTKPNIVIILIDDMGMNDVSFHGSNQILTPNIDALAYNGILLNKHY 70

  Rat    82 VQPLCTPSRSQLLTGRYQIHMGLQHYLIMTCQPNCVPLDEKLLPQLLKDAGYATHMVGKWHLGMY 146
            |..||||||:.||||:|.||.|:||::|:|.:|..:|..|:|:|::.:||||:||:|||||||.:
  Fly    71 VPNLCTPSRATLLTGKYPIHTGMQHFVIITDEPWGLPQRERLMPEIFRDAGYSTHLVGKWHLGFW 135

  Rat   147 RKECLPTRRGFDTYFGYLLGSEDYYTHEACAPIECLNGTRCA-LDLRDGEEPAKEYTDIYSTNIF 210
            ||:..||.||||.:|||..|..|||.|:    :..|:....| ||.|...||..|....|:|..|
  Fly   136 RKDLTPTMRGFDHHFGYYNGYIDYYDHQ----VRMLDRNYSAGLDFRRDLEPCPEANGTYATEAF 196

  Rat   211 TKRATTLIANHPPEKPLFLYLAFQSVH-----DPLQVPEEYMEPYDFIQDKHRRIYAGMVSLLDE 270
            |..|..:|..|...||||:.|:..:||     .|:|.|||.:..:..|:|..||.||||:|.||:
  Fly   197 TSEAKRIIEQHDKSKPLFMVLSHLAVHTGNEDSPMQAPEEEVAKFPHIRDPKRRTYAGMISSLDK 261

  Rat   271 AVGNVTKALKSRGLWNNTVLIFSTDNGGQT----RSGGNNWPLRGRKGTLWEGGIRGAGFVASPL 331
            :|.....|||..|:.||::::..:|||..|    .:.|:|:|.||:|.:.||||||.||.:.|||
  Fly   262 SVAQTIGALKDNGMLNNSIILLYSDNGAPTIGIHSNAGSNYPYRGQKESPWEGGIRSAGALWSPL 326

  Rat   332 LKQKGVKSRELMHITDWLPTLVNLAGGSTHGTKPLDGFDVWETISEGSPSPRVELLLNIDPDFF- 395
            ||::|..|.:.:|..||||||...||.|.....||||.::|..:| |:..|:...::::..:.| 
  Fly   327 LKERGYVSNQAIHAVDWLPTLAGAAGVSLPQDLPLDGINLWPMLS-GNEEPKPRTMIHVLDEVFG 390

  Rat   396 ------------DGLPCPGKNT----TPEKNDSFPLEHSAFNTSIHAGIRYKNWKLLTGYPG--- 441
                        :|....|:..    ..|.|:..||     ..|....:...:.:.|.|..|   
  Fly   391 YSSYMRDTLKYVNGSSFKGRYDQWLGELETNEDDPL-----GESYEQHVLASDVQSLLGNRGLTK 450

  Rat   442 -------------CGYWFPPPSQSNISEVPSVDSPTKTLWLFDINRDPEERHDVSREHPHIVQNL 493
                         |    ||....|..|......|.|....||:.:||.||:::::.:|..:|.|
  Fly   451 DRIRQMRSEATETC----PPIEGQNPLESHFKCEPLKAPCFFDLAKDPCERYNLAQMYPLQLQQL 511

  Rat   494 LSRLQYYHEHSVPS-YFPPLDPRCDPK-GTGVWSPW 527
            ...|:...:.::|| ..|..|.|.:|. ..|.|..|
  Fly   512 ADELEQIRKTAIPSARVPHSDSRANPTFHNGNWEWW 547

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ArsbNP_254278.1 AslA 36..484 CDD:225661 187/491 (38%)
4-S 40..483 CDD:293753 187/486 (38%)
CG7402NP_649023.1 PRK13759 25..459 CDD:237491 174/443 (39%)
4-S 28..436 CDD:293753 171/417 (41%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166351145
Domainoid 1 1.000 308 1.000 Domainoid score I1294
eggNOG 1 0.900 - - E1_COG3119
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H73870
Inparanoid 1 1.050 351 1.000 Inparanoid score I2201
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D375140at33208
OrthoFinder 1 1.000 - - FOG0000852
OrthoInspector 1 1.000 - - mtm8957
orthoMCL 1 0.900 - - OOG6_100690
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X499
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1312.660

Return to query results.
Submit another query.