DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment FUS and MSL1

DIOPT Version :9

Sequence 1:NP_004951.1 Gene:FUS / 2521 HGNCID:4010 Length:526 Species:Homo sapiens
Sequence 2:NP_012274.1 Gene:MSL1 / 854826 SGDID:S000001448 Length:111 Species:Saccharomyces cerevisiae


Alignment Length:110 Identity:25/110 - (22%)
Similarity:47/110 - (42%) Gaps:27/110 - (24%)


- Green bases have known domain annotations that are detailed below.


Human   270 DQGSRHD-SEQDNSDNNTIFVQGLGENVTIE----SVADYFKQIG-IIKTN----KKTGQPMINL 324
            |:.:.|. :|......||::|..|.|.:.::    ::...|...| ::|.:    |:.||..|.:
Yeast    12 DRDTHHTVAEPVTEAKNTLYVSQLNEKINMQRLRVNLFLLFATFGEVLKVSMNFKKQRGQAFITM 76

Human   325 YTDRETGKLKGEATVSFDDPPSAKAAIDWFDGKEFSGNPIKVSFA 369
            .|              .|....|:.::   :|:.|.|.|:||.|:
Yeast    77 RT--------------IDQASLAQISL---NGERFFGKPLKVEFS 104

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
FUSNP_004951.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..286 3/16 (19%)
RRM_FUS_TAF15 283..368 CDD:240979 21/93 (23%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 375..424
zf-RanBP 422..449 CDD:279035
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 444..526
MSL1NP_012274.1 RRM1_U1A_like 29..105 CDD:409692 21/93 (23%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.