DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment FUS and fust-1

DIOPT Version :9

Sequence 1:NP_004951.1 Gene:FUS / 2521 HGNCID:4010 Length:526 Species:Homo sapiens
Sequence 2:NP_495483.1 Gene:fust-1 / 174175 WormBaseID:WBGene00016173 Length:448 Species:Caenorhabditis elegans


Alignment Length:513 Identity:184/513 - (35%)
Similarity:221/513 - (43%) Gaps:166/513 - (32%)


- Green bases have known domain annotations that are detailed below.


Human    56 SSYGQSQNTGYGTQSTPQGYGSTGGYGSSQSSQSSYGQQSSYPGYGQQPAPSSTSGSYGSSSQSS 120
            ::|.|||    ...|||:|                   |.:|..|.||            ..|..
 Worm     2 AAYDQSQ----PDYSTPEG-------------------QQAYWAYYQQ------------QQQQQ 31

Human   121 SYGQPQSGSYSQQPSYGGQQQSYGQQQSYNPP----QGYGQQNQYNSSSGGGGGGGGGGNYGQDQ 181
            ..|||....|: ..:|||..|:...|..|.||    ..|||        |.||..||...|||  
 Worm    32 PGGQPDQDPYA-AAAYGGHDQAQQPQNPYAPPPPGADPYGQ--------GSGGQSGGSDPYGQ-- 85

Human   182 SSMSSGGGSGGGYGNQDQSGGGGSGGYGQQDRGGRGRGGSGGGGGGGGGGYNRSSGGYEPRGRGG 246
               |.|||.||..|::   ||||..|         |||||.||..||.|||....|     ||||
 Worm    86 ---SRGGGRGGFGGSR---GGGGYDG---------GRGGSRGGYDGGRGGYGGDRG-----GRGG 130

Human   247 GRGGRGG--MGGS--DRGGFNKFGGP-------RDQGSRHD----------------SEQDNSD- 283
            ||||..|  .|||  |.|..::.|||       :|:|.|.|                :.:..|| 
 Worm   131 GRGGYDGERRGGSRWDDGNSDRQGGPPGGRGGYQDRGPRRDGPPSGGGYGGGGAASGNREFGSDG 195

Human   284 ----NNTIFVQGLGENVTIESVADYFKQIGIIKTNKKTGQPMINLYTDRETGKLKGEATVSFDDP 344
                ..|:||||:........:||.|...|.|..|.:  .|.|.:||||.||:.|||..::|.|.
 Worm   196 RVELKETVFVQGISTTANEAYIADVFSTCGDIAKNDR--GPRIKIYTDRNTGEPKGECMITFVDA 258

Human   345 PSAKAAIDWFDGKEFSG--NPIKVSFATRRADF--NRGGGNGRG--GRGRGGPM-GRGGYG---G 399
            .:|:.||..::|:.|.|  :|:.:|.|..|||.  .|||..|||  |.|||||| ||||:|   |
 Worm   259 SAAQQAITMYNGQPFPGGSSPMSISLAKFRADAGGERGGRGGRGGFGGGRGGPMGGRGGFGGDRG 323

Human   400 GGSGGGGRGGFPSGGGGGGG--------------------------------------------- 419
            |..||||||||..|.|||||                                             
 Worm   324 GYGGGGGRGGFDGGRGGGGGFRGGDRGGFRGGDRGGFRGGDRGGFRGGDRGGDRGGFRGGRGVGG 388

Human   420 -----QQRAGDWKCPNPTCENMNFSWRNECNQCKAPKPDGPGGGPGGSHMGGNYGDDR 472
                 :||..||.|..  |.|.||::|.|||||:||:|||..||.||...||..|.||
 Worm   389 GNANMEQRKNDWPCEQ--CGNSNFAFRRECNQCQAPRPDGGSGGGGGERRGGPPGGDR 444

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
FUSNP_004951.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..286 85/265 (32%)
RRM_FUS_TAF15 283..368 CDD:240979 32/91 (35%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 375..424 36/106 (34%)
zf-RanBP 422..449 CDD:279035 14/26 (54%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 444..526 18/29 (62%)
fust-1NP_495483.1 RRM <202..>290 CDD:223796 34/89 (38%)
RRM_FET 203..284 CDD:240726 30/82 (37%)
ZnF_RBZ 398..421 CDD:197784 13/24 (54%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C161461974
Domainoid 1 1.000 57 1.000 Domainoid score I7900
eggNOG 1 0.900 - - E1_KOG1995
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 218 1.000 Inparanoid score I2628
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR23238
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X712
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
98.890

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