Protein Alignment Ccnb1 and CycB3

DIOPT Version :9

• Sequence 1: NP_741988.1
• Gene: Ccnb1 / 25203
• RGDID: 2291
• Length: 423
• Species: Rattus norvegicus
• Sequence 2: NP_001262934.1
• Gene: CycB3 / 42971
• FlyBaseID: FBgn0015625
• Length: 575
• Species: Drosophila melanogaster
• Alignment Length: 464
• Identity: 128/464 - (27%)
• Similarity: 205/464 - (44%)
• Gaps: 120/464 - (25%)

  Rat     1 MALRVTRNTKINTENKAKV------SMAGAKRVPVAVAASKPLLRSRTALGDIGNKVSEQSRIPL 59
            |..|.:...:.:.||..||      ::|..|..|.||.|:|     :|.||::        ::|
  Fly   132 MTTRASSKVEDSVENCHKVLDKLEEALARPKPRPKAVPAAK-----KTVLGEV--------QLP- 182

  Rat    60 KKETKKLGSGTVTVKALPKPVDKVPVCEPEV-ELDEPEPEPVMEVK------------------- 104
                           |:|.|: ::||..|.. .|..|:...|..|:
  Fly   183 ---------------AMPNPM-QIPVLLPPTHNLAAPQVAAVKPVRRISNDFNKTEDSLYMSALE 231

  Rat   105 -----------------------------HSPEPILVDTPSPSPMETSGCAPAEEYLCQAFSDVI 140
                                         ..|:|:|:..|..:|.:.....|..|
  Fly   232 DVSSCDSMRLSGNFEAARRRSAKLQQKTEQQPQPLLLTLPETAPSQVVPIPPVPE---------- 286

  Rat   141 LAVSDVDADDGGDPNLCSEYVKDIYAYLRQLEEEQSV---RPKYLLGREVTGNMRAILIDWLIQV 202
             .|.|.|..:..||...|.|..||:.||:..|.|..:   .|:.:   .:|..||.:|:||:::|
  Fly   287 -EVEDFDRKNWDDPFQVSHYAMDIFNYLKVREAEFPIADYMPRQI---HLTTWMRTLLVDWMVEV 347

  Rat   203 QMKFRLLQETMYMTVSIIDRFMQDSCVPKKMLQLVGVTAMFIASKYEEMYPPEIGDFAFVTNNTY 267
            |..|.|..||:|:.|.|:|.::....:.|:.|||:|..|.|||.||:|..||.|.||.::.:..|
  Fly   348 QETFELNHETLYLAVKIVDLYLCREVINKEKLQLLGAAAFFIACKYDERQPPLIEDFLYICDGAY 412

  Rat   268 TKHQIRQMEMKILRVLNFSLGRPLPLHFLRRASKIGEVDVEQHTLAKYLMELSMLDYDMVHFAPS 332
            ...::.:||.:.|||:.:.||.||...||||.::..:|.:...|||:|::|||::||..:.|:.|
  Fly   413 NHDELVRMERETLRVIKYDLGIPLSYRFLRRYARCAKVPMPTLTLARYILELSLMDYANISFSDS 477

  Rat   333 QIAAGAFCLALKI------LDNGEWTPTLQHYLSHTEESLLPVMQHLAKNIVMVNRGLTKH---- 387
            |:|:.|..:||::      ||...||.||.:|..:.       :...|:.:..:|.||.:.
  Fly   478 QMASAALFMALRMHGGPGQLDKQTWTSTLIYYTGYQ-------LADFAEIVTALNAGLHRKPRAT 535

  Rat   388 -MTIKNKYA 395
             .||:|||:
  Fly   536 IKTIRNKYS 544

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Ccnb1	NP_741988.1	Interaction with CDK2. /evidence=ECO:0000250	159..167		3/7 (43%)
		Cyclin_N	163..288	CDD:278560	46/127 (36%)
		Interaction with CDK2. /evidence=ECO:0000250	248..251		1/2 (50%)
		Cyclin_C	290..408	CDD:281044	39/117 (33%)
CycB3	NP_001262934.1	Cyclin_N	308..433	CDD:278560	46/127 (36%)
		Cyclin_C	435..555	CDD:281044	39/117 (33%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D475911at33208
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	1	1.000	-	-		X94
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	4	3.920