DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG31468 and Cimap1d

DIOPT Version :10

Sequence 1:NP_732890.1 Gene:CG31468 / 251937 FlyBaseID:FBgn0047351 Length:80 Species:Drosophila melanogaster
Sequence 2:NP_001178706.1 Gene:Cimap1d / 299600 RGDID:1310260 Length:277 Species:Rattus norvegicus


Alignment Length:72 Identity:27/72 - (37%)
Similarity:36/72 - (50%) Gaps:2/72 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 GPGPGAYNLPSTFGFKNCDKRMQRSPQFSFGRSSRACNSPRIPQGPGPADYHVGKITRYGRPASE 72
            |.|||.|.||||.|:.|.|.....||.:|..|  |...:|.....|||..:...|:||:||....
  Rat    43 GSGPGLYVLPSTVGYVNHDCTKAASPAYSLAR--RPSEAPLQDSSPGPVYFLDPKVTRFGRSCPP 105

  Fly    73 DFNVYRR 79
            .:::..|
  Rat   106 AYSMQGR 112

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG31468NP_732890.1 None
Cimap1dNP_001178706.1 PHA03247 <52..262 CDD:223021 21/63 (33%)

Return to query results.
Submit another query.