DRSC/TRiP Functional Genomics Resources

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Protein Alignment Casp1 and Drice

DIOPT Version :10

Sequence 1:NP_036894.3 Gene:Casp1 / 25166 RGDID:2274 Length:402 Species:Rattus norvegicus
Sequence 2:NP_524551.2 Gene:Drice / 43514 FlyBaseID:FBgn0019972 Length:339 Species:Drosophila melanogaster


Alignment Length:326 Identity:85/326 - (26%)
Similarity:139/326 - (42%) Gaps:52/326 - (15%)


- Green bases have known domain annotations that are detailed below.


  Rat    91 SGPSAETVFVTEDSKGGHPFSSETKEKLNKEGGAFPGPSGSLKFCPLEIAQKLWKENHSEIYPIM 155
            ||.:..:..|...|   ||:.|..   :.:....:..||.|.:    :...|:..:.|:..|. |
  Fly    35 SGGAGSSGLVAGSS---HPYGSGA---IGQLANGYSSPSSSYR----KNVAKMVTDRHAAEYN-M 88

  Rat   156 KTPTRTRLALIICNTDFQ--HLSRRVGADVDLREMKLLLQDLGYTVKVKENLTALEMTKELKEFA 218
            :...| .:|||..:..|:  .|..|.|.:||...:..:|:.|.:.|.|.::....::.:.: |:|
  Fly    89 RHKNR-GMALIFNHEHFEVPTLKSRAGTNVDCENLTRVLKQLDFEVTVYKDCRYKDILRTI-EYA 151

  Rat   219 ACPEHKTSDSTFLVFMSHGLQEGICGITYSNEVADILKVDTIFQMMNTLKCPSLKDKPKVIIIQA 283
            |...|..||...:..:|||..    |..|:.:..  .|:|.|:.......||||..|||:..|||
  Fly   152 ASQNHSDSDCILVAILSHGEM----GYIYAKDTQ--YKLDNIWSFFTANHCPSLAGKPKLFFIQA 210

  Rat   284 CRGEK--QGVVLLKDSVGNSEEGFLTDAIFEDDGIK----KAHIEKDFIAFCSSTPDNVSWRHPV 342
            |:|::  .||.:.:...             |.||..    |..:..||:...|:.|...|||:..
  Fly   211 CQGDRLDGGVTMQRSQT-------------ETDGDSSMSYKIPVHADFLIAYSTVPGFYSWRNTT 262

  Rat   343 QGSLFIESLIKHMKEYAWSCD----LEDIFRKVRFSFEQ--PDS-----RLQMP-TTERVTLTKR 395
            :||.|::||...:.......|    |..:.::|...||.  ||:     :.|:| .|..:|...|
  Fly   263 RGSWFMQSLCAELAANGKRLDILTLLTFVCQRVAVDFESCTPDTPEMHQQKQIPCITTMLTRILR 327

  Rat   396 F 396
            |
  Fly   328 F 328

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Casp1NP_036894.3 CARD_CASP1-like 6..87 CDD:260036
CASc 152..400 CDD:214521 73/265 (28%)
DriceNP_524551.2 CASc 86..330 CDD:214521 73/265 (28%)
Blue background indicates that the domain is not in the aligned region.

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