DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG32276 and YSY6

DIOPT Version :9

Sequence 1:NP_728830.1 Gene:CG32276 / 251645 FlyBaseID:FBgn0047135 Length:64 Species:Drosophila melanogaster
Sequence 2:NP_009721.1 Gene:YSY6 / 852460 SGDID:S000002158 Length:65 Species:Saccharomyces cerevisiae


Alignment Length:64 Identity:17/64 - (26%)
Similarity:28/64 - (43%) Gaps:10/64 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 PPQRMRVA-----NEKASKYVTMRGNVPKSSKTKEGQYPVGPWLLALFIFVVCGSAIFQIVQSI 61
            |.||:..|     |||..||     ...|..||::....:....|.:.:|::.|..:.|::..|
Yeast     6 PRQRLANAKFNKNNEKYRKY-----GKKKEGKTEKTAPVISKTWLGILLFLLVGGGVLQLISYI 64

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG32276NP_728830.1 RAMP4 2..58 CDD:399547 16/59 (27%)
YSY6NP_009721.1 RAMP4 3..61 CDD:399547 16/59 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR15601
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

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