DRSC/TRiP Functional Genomics Resources

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Protein Alignment NR5A1 and nr5a1

DIOPT Version :10

Sequence 1:NP_004950.2 Gene:NR5A1 / 2516 HGNCID:7983 Length:461 Species:Homo sapiens
Sequence 2:XP_031746117.1 Gene:nr5a1 / 100271747 XenbaseID:XB-GENE-485361 Length:496 Species:Xenopus tropicalis


Alignment Length:472 Identity:321/472 - (68%)
Similarity:372/472 - (78%) Gaps:17/472 - (3%)


- Green bases have known domain annotations that are detailed below.


Human     1 MDYSYDEDLDELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNNKHYTCTESQSCKIDKTQRKRC 65
            |||:|||||||||||||||||||||||||||||||||||||||||.|||||:|||||||||||||
 Frog    29 MDYNYDEDLDELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNNKRYTCTENQSCKIDKTQRKRC 93

Human    66 PFCRFQKCLTVGMRLEAVRADRMRGGRNKFGPMYKRDRALKQQKKAQIRANGFKLETGPPMGVPP 130
            |:|||||||.||||||||||||||||||||||||||||||||||||.|||||.||||.|.:    
 Frog    94 PYCRFQKCLNVGMRLEAVRADRMRGGRNKFGPMYKRDRALKQQKKALIRANGIKLETVPQI---- 154

Human   131 PPPPAPDYVLPPSLH--GPEPKGLAAGP-PAGPL----GDFGAPALPMAVPGAHGPLAGYLYPAF 188
            ..|...||.:..::|  .|..|.|...| |..|:    |.:|.|.|.|.:|. |.||:.|.|..|
 Frog   155 VSPAHSDYAVSTNIHTIHPVTKNLPPNPAPMTPVEYDRGPYGPPPLGMTMPN-HTPLSSYQYSNF 218

Human   189 PGRAIKSEYPEPYASPPQPGL--PYGYPE--PFSGGPNVPELILQLLQLEPDEDQVRARILGCL- 248
            ..|.||||||:.|.:...|..  .|.|||  |.|..|::||:||:||||||||.||:||||.|| 
 Frog   219 QSRTIKSEYPDHYTNIHDPTTVGTYVYPEAYPSSSPPDIPEVILKLLQLEPDESQVKARILSCLQ 283

Human   249 QEPTKSRPDQPAAFGLLCRMADQTFISIVDWARRCMVFKELEVADQMTLLQNCWSELLVFDHIYR 313
            ||.:|.|.::...|||:|:|||||..|||:|||.|:.||||||:|||.|||||||||||||||||
 Frog   284 QEQSKGRHEKLNMFGLMCKMADQTLFSIVEWARSCIYFKELEVSDQMILLQNCWSELLVFDHIYR 348

Human   314 QVQHGKEGSILLVTGQEVELTTVATQAGSLLHSLVLRAQELVLQLLALQLDRQEFVCLKFIILFS 378
            |:||.||.|||||||||:|::.:::||||.|::|:|||||||:.|.:||:||||||||||:||||
 Frog   349 QMQHSKENSILLVTGQEIEVSAISSQAGSTLNNLILRAQELVIFLHSLQVDRQEFVCLKFLILFS 413

Human   379 LDLKFLNNHILVKDAQEKANAALLDYTLCHYPHCGDKFQQLLLCLVEVRALSMQAKEYLYHKHLG 443
            ||.|||.||.|.|.||||.:.|||:||:||||||.||::.|||.|.|:|::||||:||||||||.
 Frog   414 LDEKFLENHSLAKSAQEKVSTALLEYTMCHYPHCTDKYRSLLLRLAEIRSISMQAEEYLYHKHLS 478

Human   444 NEMPRNNLLIEMLQAKQ 460
            .|:|.||||||||.||:
 Frog   479 GEVPCNNLLIEMLHAKR 495

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NR5A1NP_004950.2 NR_DBD_Lrh-1_like 13..105 CDD:143541 87/91 (96%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 119..157 13/40 (33%)
PHA03247 <137..216 CDD:223021 34/89 (38%)
NR_LBD_SF-1 223..459 CDD:132755 165/236 (70%)
Important for dimerization 230..461 163/232 (70%)
nr5a1XP_031746117.1 NR_DBD_Lrh-1_like 41..133 CDD:143541 87/91 (96%)
NR_LBD_SF-1 257..494 CDD:132755 165/236 (70%)

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