DRSC - DRSC Integrative Ortholog Prediction Tool

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Protein Alignment Gata2 and pnr

DIOPT Version :9

Sequence 1:	NP_254277.1	Gene:	Gata2 / 25159	RGDID:	2664	Length:	480	Species:	Rattus norvegicus
Sequence 2:	NP_476685.1	Gene:	pnr / 44849	FlyBaseID:	FBgn0003117	Length:	540	Species:	Drosophila melanogaster

Alignment Length:	321	Identity:	134/321 - (41%)
Similarity:	162/321 - (50%)	Gaps:	51/321 - (15%)

- Green bases have known domain annotations that are detailed below.

  Rat   155 SVASLTPTAAHSGSHLFGFPPTPPKEVSPDPSTTGAASPASPSAGGSVARGEDKDGVKYQVSLSE 219
            |.||.:.:|:.|.:|:..........|:.......|.|.||...|..|: |..:..|...|.:..
  Fly    33 SAASASTSASASATHVAAVKMYHSSAVAAYTDLAAAGSAASAGVGVGVS-GYHQQAVNAPVYVPS 96

  Rat   220 SMKME------GGSPLRPGLAPMGTQPATHHPIPTYPSYVPASAHEYGS--GLFHPGGFLGGPAS 276
            :.:..      |.:..:......|...| |...     |.|.:|...||  ..:.|.||     .
  Fly    97 NRQYNHVAAHFGSAAAQNAWTTEGFGSA-HAQF-----YSPNAAVMMGSWRSAYDPSGF-----Q 150

  Rat   277 SFTPKQRSKARSCSEGRECVNCGATATPLWRRDGTGHYLCNACGLYHKMNGQNRPLIKPKRRL-- 339
            ..:|.:.:......||||||||||.:|||||||||||||||||||||||||.|||||||.:||
  Fly   151 RSSPYESAMDFQFGEGRECVNCGAISTPLWRRDGTGHYLCNACGLYHKMNGMNRPLIKPSKRLVS 215

  Rat   340 -SAARRAGTCCANCQTTTTTLWRRNANGDPVCNACGLYYKLHNVNRPLTMKKEGIQTRNRKMSSK 403
             :|.||.|.||.||.|.||||||||.:|:|||||||||||||.|||||.|:|:|||||.||....
  Fly   216 ATATRRMGLCCTNCGTRTTTLWRRNNDGEPVCNACGLYYKLHGVNRPLAMRKDGIQTRKRKPKKT 280

  Rat   404 SKKSKKGA--------------ECFEE-------------LSKCMQE-KSSPFSAAALAGH 436
            ...|..||              ||.||             |||...: ||...|::.|.||
  Fly   281 GSGSAVGAGTGSGTGSTLEAIKECKEEHDLKPSLSLERHSLSKLHTDMKSGTSSSSTLMGH 341

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
Gata2	NP_254277.1	Disordered. /evidence=ECO:0000256\|SAM:MobiDB-lite	166..208		10/41 (24%)
		ZnF_GATA	294..344	CDD:238123	42/52 (81%)
		ZnF_GATA	349..398	CDD:238123	38/48 (79%)
		Disordered. /evidence=ECO:0000256\|SAM:MobiDB-lite	457..480
pnr	NP_476685.1	ZnF_GATA	164..212	CDD:214648	42/47 (89%)
		ZnF_GATA	168..212	CDD:238123	39/43 (91%)
		ZnF_GATA	223..270	CDD:214648	35/46 (76%)
		ZnF_GATA	226..276	CDD:238123	38/49 (78%)
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG5641
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	1	1.000	-	-		FOG0000130
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	4	3.810