Sequence 1: | NP_254277.1 | Gene: | Gata2 / 25159 | RGDID: | 2664 | Length: | 480 | Species: | Rattus norvegicus |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001262366.1 | Gene: | grn / 40962 | FlyBaseID: | FBgn0001138 | Length: | 712 | Species: | Drosophila melanogaster |
Alignment Length: | 629 | Identity: | 202/629 - (32%) |
---|---|---|---|
Similarity: | 245/629 - (38%) | Gaps: | 258/629 - (41%) |
- Green bases have known domain annotations that are detailed below.
Rat 54 SQGNPYYA---NPAHARARVSYSPAHARL----TGGQMCRPHLLHSPGLPWLDGGKAALSAAAAH 111
Rat 112 HHSPWTVSPFSKTPLHPSAAGAPGGPLSVYPGAAGGSGGGSGSSVASLTPTAAHSGSHLFGFPPT 176
Rat 177 PPKEVSPDPSTTG--------------------------AASPASPSAGGSVARGEDKDGVKY-- 213
Rat 214 -------------------------------------------------------QVSLSESMK- 222
Rat 223 -----------------MEGGSPLRPGLAPMGTQPATHHPIPTYPSYVPASAHEY---------- 260
Rat 261 -----------------------------------GSGLFHPGGFLGGPA--SSFTPKQ------ 282
Rat 283 --------------------RSKARSCSEGRECVNCGATATPLWRRDGTGHYLCNACGLYHKMNG 327
Rat 328 QNRPLIKPKRRL------SAARRAGTCCANCQTTTTTLWRRNANGDPVCNACGLYYKLHNVNRPL 386
Rat 387 TMKKEGIQTRNRKMSSKSKKSK-KGAECFEELSKCMQEKSSPFSAAALAGHMAPVGHLPP----- 445
Rat 446 -----FSHS----GHILPTPTPIHPSSSLSFGHPHPSSMVTAMG 480 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Gata2 | NP_254277.1 | Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 166..208 | 19/67 (28%) | |
ZnF_GATA | 294..344 | CDD:238123 | 47/55 (85%) | ||
ZnF_GATA | 349..398 | CDD:238123 | 45/48 (94%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 457..480 | 5/22 (23%) | |||
grn | NP_001262366.1 | ZnF_GATA | 470..517 | CDD:214648 | 44/46 (96%) |
ZnF_GATA | 473..517 | CDD:238123 | 41/43 (95%) | ||
ZnF_GATA | 529..578 | CDD:214648 | 44/48 (92%) | ||
ZnF_GATA | 533..583 | CDD:238123 | 45/49 (92%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 82 | 1.000 | Domainoid score | I8228 |
eggNOG | 1 | 0.900 | - | - | E1_COG5641 | |
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 285 | 1.000 | Inparanoid score | I2772 |
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D1240204at2759 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0000130 | |
OrthoInspector | 1 | 1.000 | - | - | otm46371 | |
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR10071 |
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 1 | 1.000 | - | - | X385 | |
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 1 | 0.960 | - | - | ||
12 | 11.930 |