DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp19a1 and Cyp4d20

DIOPT Version :9

Sequence 1:NP_058781.2 Gene:Cyp19a1 / 25147 RGDID:2457 Length:503 Species:Rattus norvegicus
Sequence 2:NP_647723.2 Gene:Cyp4d20 / 38311 FlyBaseID:FBgn0035344 Length:510 Species:Drosophila melanogaster


Alignment Length:508 Identity:116/508 - (22%)
Similarity:213/508 - (41%) Gaps:97/508 - (19%)


- Green bases have known domain annotations that are detailed below.


  Rat    26 MPLLLIMGLLLLIRNCE-----------SSSSIPGPGYCLGIGPLISHG-RFLWMG----IGSAC 74
            |.|.||.|.|:|:...:           ..|:||||   :.| |::..| :.|.:|    ||...
  Fly     1 MWLTLITGALILLLTWDFGRKRQRVLAFEKSAIPGP---ISI-PILGCGLQALHLGAENIIGWVG 61

  Rat    75 NYYNKMYGEFMRVWISGEETLIISKSSSMVHVMKHSNYISRFGSKRGLQCIGMHE-------NGI 132
            ..::| ||:..|.||.| |:||.:|.......:..|..:...|.        ::|       :|:
  Fly    62 EKFDK-YGKTFRFWILG-ESLIYTKDLQYFETILSSTTLLEKGQ--------LYEYLRPFLNDGL 116

  Rat   133 IFNNNPSLWRTVRPFFMKALTGPGLIRMVEVCVESIKQH----LDRLGDVTDNSGYVDVVTLMRH 193
            :.:.... |...|..|..|..    .:::|..||.:.:|    :|.|..|.|....||::..:..
  Fly   117 LVSTGRK-WHARRKIFTHAFH----FKVLEHYVEIMDRHSSVMVDNLRKVADGKTAVDMLKYVSL 176

  Rat   194 IMLDTSNTLFLGIPLDESS-----IVKKIQGYFNAWQALLIKPNIFFKIS----WLY-------- 241
            ..||......:|:.::..:     .:|.::      ..:.|:|:..|:.|    ||:        
  Fly   177 AALDVITEAAMGVQVNAQNDPDFPYIKALK------SVVYIQPDRMFRFSRRYNWLFPLAAPLLH 235

  Rat   242 RKYERSVKDLKDEIEILVEKKRQKVSSAE--------KLEDC----------MDFATDLIFAERR 288
            |:....::.:.|..:.::.::|:.|..|:        .|.|.          :|..  |..:...
  Fly   236 RQLLSDIRVMHDFTDKVISERRETVRRAKADGTYRPLSLGDAEIGSKSQMALLDIL--LQSSINN 298

  Rat   289 GDLTKENVNQCILEMLIAAPDTMSVTLYVMLLLIAEYPEVETAILKEIHTVVG---DRDIRIGDV 350
            ..|:..::.:.:...:....||.|..:...|..||.:|||:..|.:|:..|:|   ...:....:
  Fly   299 QPLSDADIREEVDTFMFEGDDTTSSGVSHALYAIARHPEVQQRIFEELQRVLGPDASAPVTQAQL 363

  Rat   351 QNLKVVENFINESLRYQPVVDLVMRRALEDDVIDGYPVKKGTNIILNIGRMHR-LEYFPKPNEFT 414
            |:||.::..|.|::|..|.|..:.|.|.::..|....:...|:|.|.:...|| ..|||.|..|.
  Fly   364 QDLKYLDCVIKETMRLYPPVPAIGRHAQKELEIGDKTIPANTSIYLVLYYAHRDANYFPDPLSFR 428

  Rat   415 LENFEKNVPYRY----FQPFGFGPRSCAGKYIAMVMMKVVLVTLLKRFHVKTL 463
            .|.|.::....:    :.||..||::|.|:..|::.|||::..:|:.:.:..|
  Fly   429 PERFLEDQEQGHNTFAYVPFSAGPKNCIGQKFAVLEMKVLISKVLRFYELLPL 481

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp19a1NP_058781.2 CYP19A1 72..485 CDD:410709 97/446 (22%)
Cyp4d20NP_647723.2 p450 34..493 CDD:278495 107/475 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166348681
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1247045at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24291
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.950

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