DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Slc2a4 and CG1213

DIOPT Version :9

Sequence 1:NP_036883.1 Gene:Slc2a4 / 25139 RGDID:2711 Length:509 Species:Rattus norvegicus
Sequence 2:NP_001246937.1 Gene:CG1213 / 40728 FlyBaseID:FBgn0037387 Length:491 Species:Drosophila melanogaster


Alignment Length:489 Identity:145/489 - (29%)
Similarity:228/489 - (46%) Gaps:65/489 - (13%)


- Green bases have known domain annotations that are detailed below.


  Rat    16 PQQRVTGTLVLAVFSAVLGSLQFGYNIGVINAPQKVIEQSYNATWLGRQGP--------GGPDSI 72
            |:...:|.:.:|..:|.|.:...|..:|                |....||        ..|.|.
  Fly    34 PEPVKSGRIFMAAVAANLSAFVVGTTLG----------------WTSPIGPKLKSEDTSDSPLSR 82

  Rat    73 PQGTLTTLWALSVAIFSVGGMISSFLIGIISQWLGRKRAMLANNVLAVLGGALMGLANAAASYEI 137
            |..:....|..|  :.:||.:::.|:.|.::..:|||..:|::::..||.   .||...|:...|
  Fly    83 PITSDEDAWISS--LIAVGALVAPFVAGPMADRIGRKWVLLSSSLFFVLA---FGLNMVASEVWI 142

  Rat   138 LILGRFLIGAYSGLTSGLVPMYVGEIAPTHLRGALGTLNQLAIVIGILVAQVLGLESMLGTATLW 202
            |.:.|.:.|...|....:.|||||||:..::|||.|:|.||.||.|||....:| ..:...|..|
  Fly   143 LYMSRLIQGFGVGFVMTVQPMYVGEISTDNVRGATGSLMQLFIVGGILYVYAIG-PYVSYQALQW 206

  Rat   203 PLLLAITVLPALLQLLLLPFCPESPRYLYIIRNLEGPARKSLKRLTGWA--DVSDALAELKDEKR 265
                ...|:|.:..|:.. ..|||| |.:..:..:..|.|||:.|.|.:  .|.|.:||::....
  Fly   207 ----CCIVVPVVFDLVFY-MMPESP-YFFAGKGRKSEALKSLQFLRGQSAEGVHDEMAEIQANVE 265

  Rat   266 KLERERPLSLLQLLGSRTHRQPLIIAVVLQLSQQLSGINAVFYYSTSIFELA--GVEQPAYATIG 328
            :....:. :::.|..:..:|:.|.|...|...|||||||.|.:.|.|||..|  |:: ||.|||.
  Fly   266 EAMASKG-TVMDLFKNAGNRRALFICAGLISFQQLSGINVVLFNSQSIFASANTGLD-PAIATII 328

  Rat   329 AGVVNTVFTLVSVLLVERAGRRTLHL-------LGLAGMCGCAILM-----TVALLLLERVPSMS 381
            .|.|....:.::.|:.:|.||:.:.|       :|||.: |....|     .::.::...||::.
  Fly   329 IGCVQVGSSALTPLVADRLGRKVMLLTSSSVMSIGLAAL-GAFFYMQLVKGDISSVVWMPVPALI 392

  Rat   382 YVSIVAIFGFVAFFEIGPGPIPWFIVAELFSQGPRPAAMAVAGFSNWTCNFIVGMGFQYVADAMG 446
            ..:||...||        ||:||.::.|:|....:..|.:|...:.||..|:|.. |....||:|
  Fly   393 IYNIVYCTGF--------GPLPWAVLGEMFPANIKSVASSVVASTCWTLGFLVTF-FYPSLDALG 448

  Rat   447 P-YVFLLFAVLLLGFFIFTFLRVPETRGRTFDQI 479
            . |.|.||||.::..|.|....|.||:|.:..||
  Fly   449 SYYAFWLFAVCMVVAFFFVLFVVMETKGLSLQQI 482

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Slc2a4NP_036883.1 Interaction with SRFBP1. /evidence=ECO:0000250|UniProtKB:P14672 7..13
Sugar_tr 27..483 CDD:278511 143/478 (30%)
MFS 78..447 CDD:119392 117/384 (30%)
Monosaccharide binding. /evidence=ECO:0000250|UniProtKB:P11166 298..304 5/5 (100%)
Dileucine internalization motif. /evidence=ECO:0000255 489..490
CG1213NP_001246937.1 SP 42..482 CDD:273317 141/479 (29%)
MFS 47..460 CDD:119392 134/452 (30%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100060
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X26
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.810

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