Sequence 1: | XP_008770307.1 | Gene: | Myo5b / 25132 | RGDID: | 621347 | Length: | 1854 | Species: | Rattus norvegicus |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_724569.1 | Gene: | didum / 35680 | FlyBaseID: | FBgn0261397 | Length: | 1800 | Species: | Drosophila melanogaster |
Alignment Length: | 1931 | Identity: | 746/1931 - (38%) |
---|---|---|---|
Similarity: | 1122/1931 - (58%) | Gaps: | 214/1931 - (11%) |
- Green bases have known domain annotations that are detailed below.
Rat 6 SNSSMLHCKTWQYTRVWIPDPDEVWRSAELTKDYKDGDESLQLRLEDDTILDYPIDVQNNQVPFL 70
Rat 71 RNPDILVGENDLTALSHLHEPAVLHNLKVRFLESNHIYTYCGIVLVAINPYEQLPIYGQDVIYAY 135
Rat 136 SGQNMGDMDPHIFAVAEEAYKQMARDEKNQSIIVSGESGAGKTVSAKYAMRYFATVGGSASDTNI 200
Rat 201 EEKVLASSPIMEAIGNAKTTRNDNSSRFGKYIEIGFDKKYHII---GANMRTYLLEKSRVVFQAD 262
Rat 263 DERNYHIFYQLCAAASLPEFKELALTCAEDFFYTAHGGNTTIEGVDDAEDFEKTRQALTLLGVRE 327
Rat 328 SHQISIFKIIASILHLGSVEI-------QAERDGDSCSISPQDEHLSNFCRLLGIEHSQMEHWLC 385
Rat 386 HRKLVTTSETYVKTMSLQQVVNARNALAKHIYAQLFSWIVEHINKALQTSLKQHSFIGVLDIYGF 450
Rat 451 ETFEINSFEQFCINYANEKLQQQFNSHVFKLEQEEYMKEQIPWTLIDFYDNQPCIDLIEAKLGIL 515
Rat 516 DLLDEECKVPKGTDQNWAQKLYERHSNSQHFQKPRMSNTAFIVIHFADKVEYLSDGFLEKNRDTV 580
Rat 581 YEEQINILKASKFPLVADLFRDDKDSVPATNTAKSRS-SSKINVRSSRPLM-------KAPNKEH 637
Rat 638 KKSVGYQFRTSLNLLMETLNATTPHYVRCIKPNDEKLPFHFDPKRAVQQLRACGVLETIRISAAG 702
Rat 703 YPSRWTYHDFFNRYRVLMKKRELANTTDKKNICKSVLESLIKDPDKFQFGRTKIFFRAGQVAYLE 767
Rat 768 KLRADKFREATIMIQKTVRGWLQRVKYRRLRAATLTLQRFCRGYLARRLTEHLRRTRAAIVFQKQ 832
Rat 833 YRMLKARRAYCRVRRAAVIIQSYTRAMCVRRSYRQVLTEHKATIIQKYARGWMARRHFQRQRDAA 897
Rat 898 IVIQCAFRRLKARQALKALKIEARSAEHLKRLNVGMENKVVQLQRKIDDQNKEFKTLSEQLSAVT 962
Rat 963 STHAMEVEKLKKELARYQQN-----QEADPSLQ-LQEEVQSLRTEL-----QKAHSERRVL--ED 1014
Rat 1015 THNRENGELRKRVADLEHENALLKDEKEHLNNQILRQSK-AESSQSSVEENLLIKKELEEERSRY 1078
Rat 1079 QNLVKEYSQLEQRYENLRDE--QQTPG----HRKNPSNQSSL-ESDSNYPSI-STSEIGDTEDAL 1135
Rat 1136 QQVEEIGIEKAAMDMT-VFLKLQKRVRELEQERKKLQVQLEKEQQDSKKVQVEQQNNGLDVDQDA 1199
Rat 1200 DIAYNSLKRQELESENKKLKNDLNELRKAVADQAMQDNSTHSSPDSYSLLLNQLKLAN----EEL 1260
Rat 1261 EVRKEEVLILRTQIMNADQRRLSGKNMEP-NINARTSWPNSEKHVDQEDAIEAYHGVCQTNSQTE 1324
Rat 1325 DWGYLNEDGELGLAYQGLKQVARLLEAQLQAQNLKHEEEVEHLKAQVEAMKEEMDKQQQTFCQTL 1389
Rat 1390 LLSPEAQVEFGVQQEISRLTNENLDFKELVEKLEKNEKKLKKQLK----IYMKKVQDLEAAQALA 1450
Rat 1451 QSDRR-----HHELTRQV---------------TVQRKEKDFQGMLEYHKEDEALLIRNLVTDLK 1495
Rat 1496 PQMLSGTVPCLPAYILYMCIRHADYTNDDLKVHSLLSSTINGIKKVLKKHNEDFEMTSFWLSNTC 1560
Rat 1561 RLLHCLKQYSGDEGFMTQNTAKQNEHCLKNFDLTEYRQVLSDLSIQIYQQLIKIAEGLLQPMIVS 1625
Rat 1626 AMLENESIQGLSGVRPTGYRKRSSSMVDGENSY-------CLEAIIRQMNFFHTVLCDQGLDPEI 1683
Rat 1684 ILQVFKQLFYMINAVTLNNLLLRKDACSWSTGMQLRYNISQLEEWLRGKNLQQSGAVQTMEPLIQ 1748
Rat 1749 AAQLLQLKKKTQEDAEAICSLCTSLSTQQIVKILNLYTPLNEFEERVTVSFI----RTIQAQLQE 1809
Rat 1810 RSDPQQLLLDSKHMFPVLFPFNPSALTMDSIHIPACLNL-EFLNEV 1854 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Myo5b | XP_008770307.1 | MYSc | 72..770 | CDD:214580 | 404/715 (57%) |
MYSc_Myo5 | 91..759 | CDD:276831 | 380/685 (55%) | ||
IQ | 871..891 | CDD:197470 | 8/19 (42%) | ||
DUF1690 | 910..1002 | CDD:285231 | 28/97 (29%) | ||
Rab5-bind | 919..1179 | CDD:286404 | 73/282 (26%) | ||
RILP-like | <979..1069 | CDD:304877 | 20/103 (19%) | ||
Uso1_p115_C | 1155..1267 | CDD:282695 | 26/115 (23%) | ||
GBP_C | <1340..1416 | CDD:303769 | 14/75 (19%) | ||
coiled coil | 1385..1396 | CDD:293879 | 0/10 (0%) | ||
coiled coil | 1405..1416 | CDD:293879 | 3/10 (30%) | ||
Myo5b_CBD | 1480..1851 | CDD:271261 | 142/382 (37%) | ||
didum | NP_724569.1 | MYSc | 65..778 | CDD:214580 | 404/715 (57%) |
MYSc_Myo5 | 84..767 | CDD:276831 | 380/685 (55%) | ||
IQ | 900..922 | CDD:197470 | 8/21 (38%) | ||
GBP_C | <971..1086 | CDD:303769 | 29/133 (22%) | ||
coiled coil | 1049..1068 | CDD:293879 | 6/18 (33%) | ||
coiled coil | 1077..1086 | CDD:293879 | 2/8 (25%) | ||
JAKMIP_CC3 | <1190..1299 | CDD:292653 | 35/178 (20%) | ||
Myo5_CBD | 1424..1792 | CDD:271254 | 138/375 (37%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 771 | 1.000 | Domainoid score | I79 |
eggNOG | 1 | 0.900 | - | - | E2759_KOG0160 | |
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 1251 | 1.000 | Inparanoid score | I161 |
OMA | 1 | 1.010 | - | - | QHG52542 | |
OrthoDB | 1 | 1.010 | - | - | D311886at2759 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0000014 | |
OrthoInspector | 1 | 1.000 | - | - | otm45187 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_100101 | |
Panther | 1 | 1.100 | - | - | LDO | PTHR13140 |
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 1 | 1.000 | - | - | X244 | |
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
13 | 12.880 |