Sequence 1: | XP_008770307.1 | Gene: | Myo5b / 25132 | RGDID: | 621347 | Length: | 1854 | Species: | Rattus norvegicus |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001285949.1 | Gene: | ck / 34882 | FlyBaseID: | FBgn0000317 | Length: | 2167 | Species: | Drosophila melanogaster |
Alignment Length: | 2219 | Identity: | 564/2219 - (25%) |
---|---|---|---|
Similarity: | 876/2219 - (39%) | Gaps: | 641/2219 - (28%) |
- Green bases have known domain annotations that are detailed below.
Rat 78 GENDLTALSHLHEPAVLHNLKVRFLESNHIYTYCGIVLVAINPYEQLPIYGQDVIYAYSGQNMGD 142
Rat 143 MDPHIFAVAEEAYKQMARDEKNQSIIVSGESGAGKTVSAKYAMRYFATVGGSASDTNIEEKVLAS 207
Rat 208 SPIMEAIGNAKTTRNDNSSRFGKYIEIGFDKKYHIIGANMRTYLLEKSRVVFQADDERNYHIFYQ 272
Rat 273 LCAAASLPEFKELALTCAEDFFYTAHGGNTTIEGVDDAEDFEKTRQALTLLGVRESHQISIFKII 337
Rat 338 ASILHLGSVEIQAE-RDGDSCSISPQDEHLSNFCRLLGIEHSQMEHWLCHRKLVTTSETYVKTMS 401
Rat 402 LQQVVNARNALAKHIYAQLFSWIVEHINKAL----QTSLKQHSFIGVLDIYGFETFEINSFEQFC 462
Rat 463 INYANEKLQQQFNSHVFKLEQEEYMKEQIPWTLIDFYDNQPCIDLIEAK-LGILDLLDEECKVPK 526
Rat 527 GTDQNWAQKLYERHSNSQHFQKPRMS-NTAFIVIHFADKVEYLSDGFLEKNRDTVYEEQINILKA 590
Rat 591 SKFPLVADLFRDDKDSVPATNTAKSRSSSKINVRSSRPLMKAPNKEHKKSVGYQFRTSLNLLMET 655
Rat 656 LNATTPHYVRCIKPNDEKLPFHFDPKRAVQQLRACGVLETIRISAAGYPSRWTYHDFFNRYRVLM 720
Rat 721 KKRELANTTD----KKNICKSVLESLIKDPDKFQFGRTKIFFRAGQVAYLEKLRADKFREATIMI 781
Rat 782 QKTVRGWLQRVKYRRLRAATLTLQRFCRGYLARRLTEHLR----RTRAAI---VFQKQYRMLK-- 837
Rat 838 ------------ARRAYCRVRRAAVIIQSYTRAMCVRRSYRQVLTEHK--ATIIQ---------- 878
Rat 879 ----KYARGWMARRHFQRQRDAAIVIQCAFRRLKARQALKALKIEARSAEHLKRLNVGME--NKV 937
Rat 938 VQLQRK-IDD------------------------------------QN----------------- 948
Rat 949 --KEFK------------------------------TLSEQLSA--------------------- 960
Rat 961 -----VTSTHAMEVEKLKKELARYQQNQEA-----DPSLQLQEEVQSLRTELQKAHSERRVLEDT 1015
Rat 1016 HNRENGELRKRVADLEHE----------------------------NALLKDE-----KEHLNNQ 1047
Rat 1048 ILRQSKAES-------------SQSSVEENLLIKKELEEERSRYQNLVKEYSQLEQRYENLRDEQ 1099
Rat 1100 QTPGHRKNPSNQSSLES--------------DSNYPSISTSEIGDTEDALQQVEEIGIEKAAMDM 1150
Rat 1151 TVFLKLQKRVRELEQERKKLQVQLEKEQQDSKKVQVEQQNNGLDV---------------DQDA- 1199
Rat 1200 DIAYNSLKRQELESENKKLKNDLNELRKAVADQAMQDNSTHSSPDS-YSLLLNQLK---LANEEL 1260
Rat 1261 EVRKEEVLILRTQIMNADQR-RLSGKNMEPNI--NARTSWP-----------NSEKHVDQEDAIE 1311
Rat 1312 A--YHGVCQTNSQTEDWGYLNEDGELGLAYQGLKQVARLLEAQLQAQNLKHEEEVEHLKAQVEAM 1374
Rat 1375 KEEMDKQQQTFCQTLLLSPEAQVEFGVQQEISRLTNENLDFKELVEKLEKNEKKLKKQLKIYMKK 1439
Rat 1440 VQDLEAAQALAQSDRRHHELTRQVTVQRKEKDFQGMLEYHKEDEALLIRNLVTDLKPQMLSGTVP 1504
Rat 1505 ----CL------------PAYILYMCIRHADYTNDDLKVHSL--------LSSTING-------- 1537
Rat 1538 -------------------IKKVL---KKHNED----------------FEMTSFWLSNTCRLLH 1564
Rat 1565 CLKQYSGDEGFMTQNTAKQNEHCLKNFDLTEYRQVLSDLSIQIYQQLIK---------------- 1613
Rat 1614 ----------IAEGLLQPMIVSAM-----LENESIQGLSGVRPTGYRKRSSSMVDGENSYCLEAI 1663
Rat 1664 -IRQMNFFHTVLCDQGLDPEIILQVFKQLFYMINAVTLNNLLLRKDACS---------WSTGMQL 1718
Rat 1719 RYNIS-----------------QLEEWLR-------GKNLQQSGAVQTMEPL------------- 1746
Rat 1747 ---------------------IQAAQLLQLK-----KKTQEDAEAICSLCTSLSTQQIVKI---- 1781
Rat 1782 ---LNLYTPLNE----FEERVTVSFIRTIQ------------AQLQERSDPQQLLLD-SKHMFPV 1826
Rat 1827 LFPFNPSAL 1835 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Myo5b | XP_008770307.1 | MYSc | 72..770 | CDD:214580 | 295/702 (42%) |
MYSc_Myo5 | 91..759 | CDD:276831 | 287/678 (42%) | ||
IQ | 871..891 | CDD:197470 | 10/35 (29%) | ||
DUF1690 | 910..1002 | CDD:285231 | 31/210 (15%) | ||
Rab5-bind | 919..1179 | CDD:286404 | 63/438 (14%) | ||
RILP-like | <979..1069 | CDD:304877 | 26/140 (19%) | ||
Uso1_p115_C | 1155..1267 | CDD:282695 | 23/131 (18%) | ||
GBP_C | <1340..1416 | CDD:303769 | 17/75 (23%) | ||
coiled coil | 1385..1396 | CDD:293879 | 5/10 (50%) | ||
coiled coil | 1405..1416 | CDD:293879 | 1/10 (10%) | ||
Myo5b_CBD | 1480..1851 | CDD:271261 | 90/554 (16%) | ||
ck | NP_001285949.1 | MYSc | 64..733 | CDD:214580 | 295/703 (42%) |
MYSc_Myo7 | 77..721 | CDD:276832 | 287/678 (42%) | ||
MyTH4 | <1138..1245 | CDD:214535 | 20/119 (17%) | ||
B41 | 1251..1467 | CDD:214604 | 33/217 (15%) | ||
FERM_B-lobe | 1355..1439 | CDD:271216 | 17/85 (20%) | ||
FERM_C1_MyoVII | 1461..1559 | CDD:270019 | 30/142 (21%) | ||
SH3 | 1560..1624 | CDD:302595 | 16/98 (16%) | ||
MyTH4 | 1701..1849 | CDD:214535 | 26/158 (16%) | ||
B41 | 1856..2068 | CDD:214604 | 34/226 (15%) | ||
FERM_M | 1966..2068 | CDD:278785 | 14/101 (14%) | ||
FERM_C2_MyoVII | 2064..2159 | CDD:270020 | 9/39 (23%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 1 | 0.900 | - | - | OOG6_100101 | |
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.810 |