DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Scnn1a and ppk26

DIOPT Version :9

Sequence 1:NP_113736.1 Gene:Scnn1a / 25122 RGDID:3639 Length:699 Species:Rattus norvegicus
Sequence 2:NP_648125.3 Gene:ppk26 / 38835 FlyBaseID:FBgn0035785 Length:597 Species:Drosophila melanogaster


Alignment Length:628 Identity:122/628 - (19%)
Similarity:215/628 - (34%) Gaps:215/628 - (34%)


- Green bases have known domain annotations that are detailed below.


  Rat    88 FCNNTTIHGAIRLVCSKHNRMKTAFW-AVLWLCTFGMMYWQFAL-LFEEYLSYPVSLNINLNSD- 149
            :|:.|||||...|...|...::..|| :||.|..|..:  :..| :::::.:.||.::....|. 
  Fly    74 YCDYTTIHGIRYLGEKKRPLLERLFWISVLVLSVFTCV--KLTLNIWDKWNNNPVIVSFAEKSTP 136

  Rat   150 --KLVFPAVTVCTLNPYRYTEIKEELEELDRITEQTLFDLYKYNSSYTRQAGARRRSSRDLLGAF 212
              ::.|||||||       .|.|            |..:::.:..||                  
  Fly   137 VWQIPFPAVTVC-------PETK------------TRREIFNFTDSY------------------ 164

  Rat   213 PHPLQRLRTPPPPYSGRTARSGSSSVRDNNPQVDRKDWKIGF-----QLCNQNKSDCFYQTYSSG 272
                         :..|..:|..|.:      ||..|.:.|.     |:|..:..|     .:.|
  Fly   165 -------------HQVRDFQSNVSGI------VDLSDKQKGLYGAVSQVCEPHLHD-----VTLG 205

  Rat   273 VDAVREWYRFHYINILSRLSDTSPALEEEALGNFIFTCRFNQAP--CNQANYSKFHHPMY--GNC 333
            ....|.      :.|:..|::.||..::..|     .|::..:|  |:..    ||..:.  |.|
  Fly   206 NKTRRG------MEIIDALTEVSPHFDDTYL-----NCKWRNSPVKCSDI----FHKFVTEDGVC 255

  Rat   334 YTFNDKNNSNLWMS---------------SM-----------------------PGVNNGLSLTL 360
            ::||..:.:.::.:               ||                       ||...||.|.:
  Fly   256 FSFNSLSPAEIFRAEGIIPDFIFREENRLSMDWNVEDGYSASADTSPYPNRVLGPGARAGLYLFM 320

  Rat   361 RTEQNDFIPLL-STVTGARVMVHGQDEPAFMDDGGFNLRPGVETSISMRKEALDSLGGNYGDCTE 424
            ...:.||..:. ..|.|.::::|...:.|.:....|.:....|..||:|.:.:.:..|       
  Fly   321 GGAEIDFDDMCRGPVQGFKILLHTPGDVAQVSKQYFRIPFDQEVLISIRPKIITTSDG------- 378

  Rat   425 NGSDVPVKNLYPSK----------------YTQQVCIHSCFQENMIKKCGCAYIFYPKPKGVEFC 473
                  :|:..|::                |:|..|...|.....:.||||.....|:...:..|
  Fly   379 ------LKHYEPNRRQCYFQKERELRYFNIYSQSNCELECLANFTLTKCGCVKFSMPRNVNMPVC 437

  Rat   474 DYRKQSSWGYCYYKLQ---------------GAFSLDSLGCFSKCRKPCSVINYKLSAGYSRWPS 523
            ......    ||.:.:               |..:.....|  .|...|:.|.|:        ..
  Fly   438 GDASLK----CYNQAEDELLLREFTQGLVNAGENTRGETEC--NCLPSCTSIAYE--------AE 488

  Rat   524 VKSQDWIFEMLSLQNNYTIN----------NKRNG--VAKLNIFFKELNYKTNSESPSVTMVSLL 576
            :...|:.::.:       ||          :||.|  :::::|||||..:.|:..|........|
  Fly   489 ISQADFDYKTV-------INTDSPEGKEEQSKRQGMKMSRVSIFFKEAQFLTSRRSELYGTTDFL 546

  Rat   577 SNLGSQWSLWFGSSVLSVVEMAELIFDLLVITLLMLLRRFRSR 619
            :|.|....|:.|.|:||:||       |:....:.|:...|.|
  Fly   547 ANCGGLLGLFMGVSMLSIVE-------LIYFCTVRLISNLRMR 582

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Scnn1aNP_113736.1 ENaC 80..677 CDD:273304 122/628 (19%)
deg-1 88..600 CDD:273309 118/607 (19%)
ppk26NP_648125.3 ASC 74..570 CDD:279230 119/614 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 111 1.000 Domainoid score I6095
eggNOG 1 0.900 - - E1_KOG4294
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D303969at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X60
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.820

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