DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment bru2 and WHI3

DIOPT Version :10

Sequence 1:NP_001036356.1 Gene:bru2 / 250811 FlyBaseID:FBgn0262475 Length:893 Species:Drosophila melanogaster
Sequence 2:NP_014202.1 Gene:WHI3 / 855524 SGDID:S000005141 Length:661 Species:Saccharomyces cerevisiae


Alignment Length:533 Identity:120/533 - (22%)
Similarity:177/533 - (33%) Gaps:144/533 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 TAVASAAAATTMLATAPVAHVANG----NNSNSSAGSSSNSNSSSNNHSLYSNNNLNTGNNSQQQ 94
            |.|......|..|.:.|.:.:.|.    |.|||  |....|..|..:...:|:...|....||||
Yeast   187 TTVEIIDDTTKNLVSFPSSAIFNDTSRLNKSNS--GMKRPSLLSQRSRFSFSDPFSNDSPLSQQQ 249

  Fly    95 QQQQQQHPQILPVKYEYLEN---------------LTSSGATSG----------AIAATTTFTGA 134
            .|||||.|| .|.::...::               |:|.|...|          ::.:|...:..
Yeast   250 SQQQQQQPQ-QPQQHSTQKHSPQQCNQQQVNSSIPLSSQGQVIGLHSNHSHQDLSVESTIQTSDI 313

  Fly   135 AKSFHPYLRPTGSGSNSNNSIAALSTTTAATAAKMST------TLFETLLHNQINSSPIALP--A 191
            .|||  .||   ..:..|..|...|...::....|||      ||.........:.|...||  |
Yeast   314 GKSF--LLR---DNTEINEKIWGTSGIPSSINGYMSTPQPSTPTLEWGNTSASQHGSSFFLPSAA 373

  Fly   192 ATAIAAISAAATA---ATATPGTAATAAAAAAAAPSTQ--------LNSSINSRTSLGDQGGAIV 245
            :||||..::..:|   |::..|.:...|..|.:|.|.|        :|:|:.|..||        
Yeast   374 STAIAPTNSNTSANANASSNNGASNNGANQALSASSQQPMMQIGNTINTSLTSSNSL-------- 430

  Fly   246 VVTPAPPVAAPPTGGPNRNQSPTRDCSVKMELMESTSPDSIKDQPDADNIKMFVGQIPKTWDETR 310
                      ||.|                 ||.|.| ..|.:..:..::.:    .|:..:...
Yeast   431 ----------PPYG-----------------LMSSQS-QHISNMVNTSDMNI----TPQKQNRFM 463

  Fly   311 LRQMFEQFGPVHTLNV----------------LRDKVTSISRGCCFVTYYTRKAALRAQD--ALH 357
            .:...|...||:..|.                ..:..||:|      :..|..|::...|  .|.
Yeast   464 QQPQPEHMYPVNQSNTPQKVPPARLSSSRNSHKNNSTTSLS------SNITGSASISQADLSLLA 522

  Fly   358 NIKTLDGMHHPIQMKPADSENRNERKLFVGMLNKKYTEADVRQLFTGHGTIEECTVLRDQA---G 419
            .|        |....||| :|.....|:||.|....||.::||||:|.......:......   |
Yeast   523 RI--------PPPANPAD-QNPPCNTLYVGNLPSDATEQELRQLFSGQEGFRRLSFRNKNTTSNG 578

  Fly   420 QSKG-CAFVTFATKQNAIGAIKALHQSQTMEGCSAPLVVKFADTQKEKDQKKMQQIHAFCGINTP 483
            .|.| ..||.|.....|..|:..|:..|...           .|...|...::.......|:..|
Yeast   579 HSHGPMCFVEFDDVSFATRALAELYGRQLPR-----------STVSSKGGIRLSFSKNPLGVRGP 632

  Fly   484 SGATAGAATPTIN 496
            :....|:..|..|
Yeast   633 NSRRGGSGNPNPN 645

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bru2NP_001036356.1 RRM_SF 294..375 CDD:473069 15/98 (15%)
RRM_SF 381..461 CDD:473069 21/83 (25%)
RRM_SF 801..892 CDD:473069
WHI3NP_014202.1 dRRM_Rrp7p 510..>559 CDD:454777 18/57 (32%)
RRM_scw1_like 536..624 CDD:409691 23/98 (23%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.