Protein Alignment bru2 and FCA

DIOPT Version :9

• Sequence 1: NP_001036356.1
• Gene: bru2 / 250811
• FlyBaseID: FBgn0262475
• Length: 893
• Species: Drosophila melanogaster
• Sequence 2: NP_001319956.1
• Gene: FCA / 827323
• AraportID: AT4G16280
• Length: 747
• Species: Arabidopsis thaliana
• Alignment Length: 671
• Identity: 175/671 - (26%)
• Similarity: 259/671 - (38%)
• Gaps: 141/671 - (21%)

  Fly   247 VTPAPPVAAPPTGGPNRNQSPTRDCSVKMELMESTSPDSIKDQPDADNIKMFVGQIPKTWDETRL 311
            |.|..|....|..|..|.. |..|..       |.:...:.|:  :..:|:|||.:|:|..|..:
plant    82 VRPTTPPVQQPLSGQKRGY-PISDHG-------SFTGTDVSDR--SSTVKLFVGSVPRTATEEEI 136

  Fly   312 RQMFEQFGPVHTLNVLRDKVTSISRGCCFVTYYTRKAALRAQDALHNIKTLDGMHHPIQMKPADS 376
            |..|||.|.|..:.:::||.|...:|||||.|.|.|.|.||..||||..||.|...|:|::.||.
plant   137 RPYFEQHGNVLEVALIKDKRTGQQQGCCFVKYATSKDADRAIRALHNQITLPGGTGPVQVRYADG 201

  Fly   377 ENRN----ERKLFVGMLNKKYTEADVRQLFTGHGTIEECTVLRDQAGQSKGCAFVTFATKQNAIG 437
            |...    |.|||||.|||:.||.:|.::|...|.:|:..::||:..||:||.||.:::|:.|:.
plant   202 ERERIGTLEFKLFVGSLNKQATEKEVEEIFLQFGHVEDVYLMRDEYRQSRGCGFVKYSSKETAMA 266

  Fly   438 AIKALHQSQTMEGCSAPLVVKFADTQKEKDQKKMQQIHAFCGINTPSGATAGAATPTIN------ 496
            ||..|:.:.||.||:.||:|:||:.::.|..:. :::....|:.:.....|....||.|
plant   267 AIDGLNGTYTMRGCNQPLIVRFAEPKRPKPGES-REMAPPVGLGSGPRFQASGPRPTSNFGDSSG 330

  Fly   497 ---------AATALIAAPPS------AGRT-NPSMAAALAAVPQVQQAGSAATAPTTLVPLNSTT 545
                     .||:....|||      ||.. :|....|.....|....|.....|...:|:
plant   331 DVSHTNPWRPATSRNVGPPSNTGIRGAGSDFSPKPGQATLPSNQGGPLGGYGVPPLNPLPV---- 391

  Fly   546 ALSASLTPNLLATNAAHQGAAAAAAYLGADPAAAAHL-QLYQQLHGYGLSPAHYLPGLNF---HH 606
                             .|.:::|.....:.||..|: .|.:.||.....|....|..||   ..
plant   392 -----------------PGVSSSATLQQQNRAAGQHITPLKKPLHSPQGLPLPLRPQTNFPGAQA 439

  Fly   607 PPENSAHHSQHSPGIGGASAASLSAAAATAASNPLGGAPPPTP-----TPTSSAGHAAGAGLLAA 666
            |.:|...:|...|........::|.|.|           |.||     .||:    .:.|.:...
plant   440 PLQNPYAYSSQLPTSQLPPQQNISRATA-----------PQTPLNINLRPTT----VSSATVQFP 489

  Fly   667 PSMSMQNLVALLATPTAHHQLSLHHSSSSSGHNNGNSSATSGLH---------NQRL-------- 714
            |....|.|..:...|:...||....:.|.......:..|.|.|.         ||.|
plant   490 PRSQQQPLQKMQHPPSELAQLLSQQTQSLQATFQSSQQAISQLQQQVQSMQQPNQNLPLSQNGRA 554

  Fly   715 ---TYAAAPPPPPISTTYNMPQLIGHTATPTQPGGSSQSL-TFNALWPPNAA-DPYSSSLSGLTN 774
               .:|.:..|...|||.:.|.....||.|    ..|||: :....|..:.: |.:....:|||.
plant   555 GKQQWAGSAIPRVASTTGSTPVSYVQTAAP----AVSQSVGSVKCTWTEHTSPDGFKYYYNGLTG 615

  Fly   775 GAAYGAAS----------------------------QPVTTSALQAAAAGVTGKQIEGPDGSNLF 811
            .:.:....                            ||:.... |.......|:|::.|..|:|
plant   616 ESKWEKPEEMIVFEREQQKQQQHQEKPTIQQSQTQLQPLQQQP-QQVQQQYQGQQLQQPFYSSL- 678

  Fly   812 IYHLPQEFIDTDLASTFLPFG 832
             |..|....:|...|  ||.|
plant   679 -YPTPGASHNTQYPS--LPVG 696

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
bru2	NP_001036356.1	RRM1_CELF1_2_Bruno	294..375	CDD:241075	36/80 (45%)
		RRM2_Bruno_like	381..461	CDD:241080	36/79 (46%)
		RRM_SF	801..892	CDD:302621	11/32 (34%)
FCA	NP_001319956.1	LSM_int_assoc	<121..497	CDD:330438	122/412 (30%)
		RRM1_FCA	121..200	CDD:241077	36/78 (46%)
		RRM2_FCA	212..291	CDD:241081	36/78 (46%)
		WW	597..624	CDD:238122	5/26 (19%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Domainoid	1	1.000	62	1.000	Domainoid score	I3741
eggNOG	1	0.900	-	-		E1_KOG0144
Hieranoid	1	1.000	-	-
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1209165at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	1	0.900	-	-		OOG6_100683
Panther	1	1.100	-	-	O	PTHR24012
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	8	7.820