DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment bru2 and celf6

DIOPT Version :9

Sequence 1:NP_001036356.1 Gene:bru2 / 250811 FlyBaseID:FBgn0262475 Length:893 Species:Drosophila melanogaster
Sequence 2:XP_017207462.1 Gene:celf6 / 794913 ZFINID:ZDB-GENE-120215-101 Length:440 Species:Danio rerio


Alignment Length:564 Identity:202/564 - (35%)
Similarity:262/564 - (46%) Gaps:163/564 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   291 DADNIKMFVGQIPKTWDETRLRQMFEQFGPVHTLNVLRDKVTSISRGCCFVTYYTRKAALRAQDA 355
            |.|.||:|:||||:..:|..|:.:||:||.::.|.||:|:.|.:.:||.|:||..|::||:||.|
Zfish    30 DHDAIKLFIGQIPRNLEEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCARESALKAQSA 94

  Fly   356 LHNIKTLDGMHHPIQMKPADSENR-NERKLFVGMLNKKYTEADVRQLFTGHGTIEECTVLRDQAG 419
            ||..|||.||:.|||:||||||.| .|||||||||.|:..|.|||.||...|.||||||||...|
Zfish    95 LHEQKTLPGMNRPIQVKPADSEGRGEERKLFVGMLGKQQCEEDVRCLFEAFGQIEECTVLRGPDG 159

  Fly   420 QSKGCAFVTFATKQNAIGAIKALHQSQTMEGCSAPLVVKFADTQKEKDQKKMQQIHAFCGINTPS 484
            .|||||||.|::...|..||.:||..|||.|.|:.||||||||.||:..::|.|:....||.:|.
Zfish   160 ASKGCAFVKFSSHAEAQAAINSLHGGQTMPGASSSLVVKFADTDKERTLRRMHQMAGQLGIFSPM 224

  Fly   485 GATAGAATPTINAATALIAAPPSAGRTNPSMAAALAAVPQVQQAGSAATAPTTLVPLNSTTALSA 549
            ....||    ..|.|                .|.:....|.|.|..|||..:.|.|:        
Zfish   225 SVQFGA----YGAYT----------------HAQMIQQQQQQAALMAATQSSYLNPM-------- 261

  Fly   550 SLTPNLLATNAAHQGAAAAAAYLGADPAAAAHLQLYQQLHGYGLSPAHYLPGLNFHHPPENSAHH 614
                           ||.|||.:             ||:..:.|:                    
Zfish   262 ---------------AALAAAQM-------------QQIAAFNLN-------------------- 278

  Fly   615 SQHSPGIGGASAASLSAAAATAASNPLGGAPPPTPTPTSSAGHAAGAGLLAAPSMSMQNLVALLA 679
                         .|.||..|.:|   |.:.||         ..:|:||   .||.:....||.|
Zfish   279 -------------GLLAAPMTPSS---GSSTPP---------GISGSGL---SSMGVNGFSALAA 315

  Fly   680 TPTAHHQLSLHHSSSSSGHNNGNSSATSGLHNQRLTYAAAPPPPPISTTYNMPQLIGHTATPTQP 744
                          .|:|.....:..|:|:|           |.|                    
Zfish   316 --------------QSNGQPASETLYTNGIH-----------PYP-------------------- 335

  Fly   745 GGSSQSLTFNALWPPNAADPYSSSLSGLTN-GAAYGAASQPVTTSALQAAAAGVTGKQIEGPDGS 808
               :||        |..|||...:.:|:.: .|||..|..|::.:..|.... :..:|.|||:|.
Zfish   336 ---AQS--------PTVADPLQQAYAGVQHYAAAYPTAYAPISQAFAQQPPI-IPQQQREGPEGC 388

  Fly   809 NLFIYHLPQEFIDTDLASTFLPFGNVLSAKVFIDKQTNLSKCFG 852
            |||||||||||.|.:|...|||||||:|||||:|:.||.|||||
Zfish   389 NLFIYHLPQEFGDAELMQMFLPFGNVISAKVFVDRATNQSKCFG 432

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bru2NP_001036356.1 RRM1_CELF1_2_Bruno 294..375 CDD:241075 41/80 (51%)
RRM2_Bruno_like 381..461 CDD:241080 49/79 (62%)
RRM_SF 801..892 CDD:302621 38/52 (73%)
celf6XP_017207462.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1209165at2759
OrthoFinder 1 1.000 - - FOG0000286
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100683
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X208
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
65.820

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