DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment bru2 and CELF5

DIOPT Version :9

Sequence 1:NP_001036356.1 Gene:bru2 / 250811 FlyBaseID:FBgn0262475 Length:893 Species:Drosophila melanogaster
Sequence 2:NP_068757.2 Gene:CELF5 / 60680 HGNCID:14058 Length:485 Species:Homo sapiens


Alignment Length:668 Identity:247/668 - (36%)
Similarity:305/668 - (45%) Gaps:218/668 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   246 VVTPAP-PVAA---PPTGGPNRNQSPTRDCSVKMELMESTSPDSIKDQPDADNIKMFVGQIPKTW 306
            ::.|.| ||.:   .|.||                     .||.:|   |.|.||:||||||:..
Human    16 LLQPRPSPVGSSGPEPPGG---------------------QPDGMK---DLDAIKLFVGQIPRHL 56

  Fly   307 DETRLRQMFEQFGPVHTLNVLRDKVTSISRGCCFVTYYTRKAALRAQDALHNIKTLDGMHHPIQM 371
            ||..|:.:|||||.::.|.||:|..|.:.:||.|:||..|.:|::||.|||..|||.||..|||:
Human    57 DEKDLKPLFEQFGRIYELTVLKDPYTGMHKGCAFLTYCARDSAIKAQTALHEQKTLPGMARPIQV 121

  Fly   372 KPADSENR--NERKLFVGMLNKKYTEADVRQLFTGHGTIEECTVLRDQAGQSKGCAFVTFATKQN 434
            ||||||:|  .:||||||||||:.:|.||.:||...|.|:||||||...|.|||||||.|::...
Human   122 KPADSESRGGRDRKLFVGMLNKQQSEEDVLRLFQPFGVIDECTVLRGPDGSSKGCAFVKFSSHTE 186

  Fly   435 AIGAIKALHQSQTMEGCSAPLVVKFADTQKEKDQKKMQQIHAFCGINTPSGATAGAATPTINAAT 499
            |..||.|||.||||.|.|:.||||||||.||:..::|||:....||.|||               
Human   187 AQAAIHALHGSQTMPGASSSLVVKFADTDKERTLRRMQQMVGQLGILTPS--------------- 236

  Fly   500 ALIAAPPSAGRTNPSMAAALAAVPQVQQAGSAATAPTTLVPLNSTTALSASLTPNLLATNAAHQG 564
              :..|.|     |..|.|.|.:.|                  .||.||.|              
Human   237 --LTLPFS-----PYSAYAQALMQQ------------------QTTVLSTS-------------- 262

  Fly   565 AAAAAAYLGADPAAAAHLQLYQQLHGYGLSPAHYLPGLNFHHPPENSAHHSQHSPGIGGASAASL 629
                .:||.                          ||:.|      |..|.|.   ||..|    
Human   263 ----GSYLS--------------------------PGVAF------SPCHIQQ---IGAVS---- 284

  Fly   630 SAAAATAASNPLGGAPPPTPTPTSSAGHAAGAGLLAAPSMSMQNLVALLATPTAHHQLSLHHSSS 694
                       |.|.|                                 |||.|           
Human   285 -----------LNGLP---------------------------------ATPIA----------- 294

  Fly   695 SSGHNNGNSSATSGLHNQRLTYAAAPPPPPISTTYNMPQLI-----GHTATPTQPGG--SSQSLT 752
                      ..||||:           ||:..|..:|.|:     |.......|||  :.:::.
Human   295 ----------PASGLHS-----------PPLLGTTAVPGLVAPITNGFAGVVPFPGGHPALETVY 338

  Fly   753 FNALWP-----PNAADPYSSSLSGLTNGAAY--GAASQPVTTSALQAAAAGVTGKQIEGPDGSNL 810
            .|.|.|     |..|:....:.||:....|.  .||..|:..|..|.... :..:|.|||:|.||
Human   339 ANGLVPYPAQSPTVAETLHPAFSGVQQYTAMYPTAAITPIAHSVPQPPPL-LQQQQREGPEGCNL 402

  Fly   811 FIYHLPQEFIDTDLASTFLPFGNVLSAKVFIDKQTNLSKCFGFVSYDNPHSANAAIQAMHGFQIG 875
            |||||||||.||:|...||||||::|:|||:|:.||.||||||||:|||.||.||||||:|||||
Human   403 FIYHLPQEFGDTELTQMFLPFGNIISSKVFMDRATNQSKCFGFVSFDNPASAQAAIQAMNGFQIG 467

  Fly   876 SKRLKVQLKRSKDAAKPY 893
            .|||||||||.||...||
Human   468 MKRLKVQLKRPKDPGHPY 485

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bru2NP_001036356.1 RRM1_CELF1_2_Bruno 294..375 CDD:241075 43/80 (54%)
RRM2_Bruno_like 381..461 CDD:241080 49/79 (62%)
RRM_SF 801..892 CDD:302621 67/90 (74%)
CELF5NP_068757.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..40 9/44 (20%)
RRM1_CELF3_4_5_6 40..126 CDD:410041 47/88 (53%)
half-pint 46..>372 CDD:130706 160/498 (32%)
RRM2_CELF3_4_5_6 133..213 CDD:410043 49/79 (62%)
RRM3_CELF3_4_5_6 396..474 CDD:241083 58/77 (75%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0144
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1209165at2759
OrthoFinder 1 1.000 - - FOG0000286
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100683
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3223
SonicParanoid 1 1.000 - - X208
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
76.750

Return to query results.
Submit another query.