DRSC/TRiP Functional Genomics Resources

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Protein Alignment bru2 and celf5a

DIOPT Version :9

Sequence 1:NP_001036356.1 Gene:bru2 / 250811 FlyBaseID:FBgn0262475 Length:893 Species:Drosophila melanogaster
Sequence 2:XP_021325030.1 Gene:celf5a / 568052 ZFINID:ZDB-GENE-050208-746 Length:552 Species:Danio rerio


Alignment Length:676 Identity:254/676 - (37%)
Similarity:320/676 - (47%) Gaps:187/676 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   250 APPVAAPPTGGPNRNQSPTRDCSVKMELMESTS--PD--SIKDQPDADNIKMFVGQIPKTWDETR 310
            |.|...|....|:::|.........|...||.|  |:  ::|||   |.||:|:||||:..:|..
Zfish    32 AAPTQHPLLLIPHQHQYAQIPFPKPMNGSESISIHPENGTMKDQ---DAIKLFIGQIPRNLEEKD 93

  Fly   311 LRQMFEQFGPVHTLNVLRDKVTSISRGCCFVTYYTRKAALRAQDALHNIKTLDGMHHPIQMKPAD 375
            |:.:|||||.:|.|.||:|:.|.:.:||.|:||..|::|::||:|||..|||.||..|||:||||
Zfish    94 LKPLFEQFGKIHELTVLKDRYTGMHKGCAFLTYCARESAIKAQNALHEQKTLPGMTRPIQVKPAD 158

  Fly   376 SENRNE-RKLFVGMLNKKYTEADVRQLFTGHGTIEECTVLRDQAGQSKGCAFVTFATKQNAIGAI 439
            ||:|.| ||||||||||:.||.||.:||..:|.||||||||...|.|||||||.|:|...|..||
Zfish   159 SESRGEDRKLFVGMLNKQQTEEDVYRLFEPYGVIEECTVLRGPDGNSKGCAFVKFSTHAEAQSAI 223

  Fly   440 KALHQSQTM---------EGCSAPLVVKFADTQKEKDQKKMQQIHAFCGINTPSGATAGAATPTI 495
            .|||.||||         :|.|:.||||||||.||:..::|||:....||..|:           
Zfish   224 SALHGSQTMPTGSDSLLPQGASSSLVVKFADTDKERTIRRMQQMVGQFGIFNPA----------- 277

  Fly   496 NAATALIAAPPSAGRTNPSMAAALAAVPQVQQAGSAATAPTTLVPLNSTTALSASLTPNLLATNA 560
                  ||.|.|   |..:.|.||     :||                                 
Zfish   278 ------IALPFS---TYSTYAHAL-----MQQ--------------------------------- 295

  Fly   561 AHQGAAAAAAYLGADPAAAAHLQLYQQLHGYGLSPAHYLPGLNFHHPPENSAHHSQHSPGIGGAS 625
              |.|..||:                  ||..|:|:...|....|.              :|..:
Zfish   296 --QAALMAAS------------------HGGYLAPSVAFPTTQIHQ--------------MGALN 326

  Fly   626 AASLSAAAATAASNPLGGAPPPTP-TPTSSAGHAAGAGLLAAPSMSMQNLVALLATPTAHHQLSL 689
            ..||                |||| ||.|...|...|||.:.|:....:.|..:.||..:...|:
Zfish   327 INSL----------------PPTPMTPVSGEFHQTLAGLSSPPANITTSAVPSIVTPIVNGFTSI 375

  Fly   690 HHSSSSSGHNNGNSSATSGLHNQRLTYAAAPPPPPISTTYNMPQLIGHTATPTQPGGSSQSLT-- 752
            .|  ..:||....:..|:||             ||.|           |.:||......|:.|  
Zfish   376 PH--QPNGHPAVEAVYTNGL-------------PPYS-----------TQSPTAADTLQQAFTGV 414

  Fly   753 ---------------FNALWPPNAADPYSSSLSGLTNGAAYGAASQPVTTSALQAAAAGVTGKQI 802
                           ...::|.....|...||            .||......|....|      
Zfish   415 QQYTDLSDIREHPLYLYTIYPATTLTPIGQSL------------PQPPQVIQQQQQREG------ 461

  Fly   803 EGPDGSNLFIYHLPQEFIDTDLASTFLPFGNVLSAKVFIDKQTNLSKCFGFVSYDNPHSANAAIQ 867
            |||:|.|||||||||||.|.:|...|||||.|:|:|||:|:.||.||||||||:|||.||.||||
Zfish   462 EGPEGCNLFIYHLPQEFGDNELMQMFLPFGTVISSKVFMDRATNQSKCFGFVSFDNPASAQAAIQ 526

  Fly   868 AMHGFQIGSKRLKVQLKRSKDAAKPY 893
            ||:|||||.|||||||||.|||::||
Zfish   527 AMNGFQIGMKRLKVQLKRPKDASRPY 552

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bru2NP_001036356.1 RRM1_CELF1_2_Bruno 294..375 CDD:241075 42/80 (53%)
RRM2_Bruno_like 381..461 CDD:241080 53/89 (60%)
RRM_SF 801..892 CDD:302621 66/90 (73%)
celf5aXP_021325030.1 RRM1_CELF3_4_5_6 73..159 CDD:241076 47/88 (53%)
RRM <80..436 CDD:330708 162/489 (33%)
RRM2_CELF3_4_5_6 165..254 CDD:241079 52/88 (59%)
RRM3_CELF3_4_5_6 463..541 CDD:241083 57/77 (74%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0144
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1209165at2759
OrthoFinder 1 1.000 - - FOG0000286
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100683
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X208
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
65.720

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