Sequence 1: | NP_001036356.1 | Gene: | bru2 / 250811 | FlyBaseID: | FBgn0262475 | Length: | 893 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_031746314.1 | Gene: | celf3 / 549245 | XenbaseID: | XB-GENE-5796618 | Length: | 462 | Species: | Xenopus tropicalis |
Alignment Length: | 623 | Identity: | 236/623 - (37%) |
---|---|---|---|
Similarity: | 306/623 - (49%) | Gaps: | 181/623 - (29%) |
- Green bases have known domain annotations that are detailed below.
Fly 289 QPDADNIKMFVGQIPKTWDETRLRQMFEQFGPVHTLNVLRDKVTSISRGCCFVTYYTRKAALRAQ 353
Fly 354 DALHNIKTLDGMHHPIQMKPADSENRNE-RKLFVGMLNKKYTEADVRQLFTGHGTIEECTVLRDQ 417
Fly 418 AGQSKGCAFVTFATKQNAIGAIKALHQSQTMEGCSAPLVVKFADTQKEKDQKKMQQIHAFCGINT 482
Fly 483 PSGATAGAATPTINAAT--------ALIAAPPSAGRTNPSMAAALAAVPQVQQAGSA---ATAPT 536
Fly 537 TLVPLNSTTALSASLTPNLLATNAAHQGAAAAAAYLGADPAAAAHLQLYQQLHGYGLSPAHYLPG 601
Fly 602 LNFHHPPENSAHHSQHSPGIGGASAASLSAAAATAASNPLGGAPPPTPTPTSSAGHAAGAGLLAA 666
Fly 667 PSMSMQNLVALLATPTAHHQLSLHHSSSSSGHNNGNSSATSGLHNQRLTYAAAPPPPPISTTYNM 731
Fly 732 PQLIGHTATPTQPGGSSQSLTFNALWPPNAADPYSSSLSGLTN-GAAYGAASQPVTTSALQAAA- 794
Fly 795 ----AGVTGKQIEGPDGSNLFIYHLPQEFIDTDLASTFLPFGNVLSAKVFIDKQTNLSKCFGFVS 855
Fly 856 YDNPHSANAAIQAMHGFQIGSKRLKVQLKRSKDAAKPY 893 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
bru2 | NP_001036356.1 | RRM1_CELF1_2_Bruno | 294..375 | CDD:241075 | 43/80 (54%) |
RRM2_Bruno_like | 381..461 | CDD:241080 | 48/80 (60%) | ||
RRM_SF | 801..892 | CDD:302621 | 67/90 (74%) | ||
celf3 | XP_031746314.1 | RRM1_CELF3_4_5_6 | 2..88 | CDD:410041 | 47/86 (55%) |
half-pint | 8..>375 | CDD:130706 | 166/527 (31%) | ||
RRM2_CELF3_4_5_6 | 94..174 | CDD:410043 | 47/79 (59%) | ||
RRM3_CELF3_4_5_6 | 373..451 | CDD:241083 | 57/77 (74%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D1209165at2759 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0000286 | |
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 1 | 1.000 | - | - | X208 | |
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
4 | 4.010 |