DRSC/TRiP Functional Genomics Resources

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Protein Alignment bru2 and celf2

DIOPT Version :9

Sequence 1:NP_001036356.1 Gene:bru2 / 250811 FlyBaseID:FBgn0262475 Length:893 Species:Drosophila melanogaster
Sequence 2:XP_021330627.1 Gene:celf2 / 373117 ZFINID:ZDB-GENE-030826-35 Length:558 Species:Danio rerio


Alignment Length:612 Identity:262/612 - (42%)
Similarity:339/612 - (55%) Gaps:114/612 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   288 DQPDADNIKMFVGQIPKTWDETRLRQMFEQFGPVHTLNVLRDKVTS--ISRGCCFVTYYTRKAAL 350
            ||||.|.|||||||||::|.|..|:::||.:|.|:.:|:|||:..:  .|:||||||:|||||||
Zfish    55 DQPDPDAIKMFVGQIPRSWSEKELKELFEPYGAVYQINILRDRSQNPPQSKGCCFVTFYTRKAAL 119

  Fly   351 RAQDALHNIKTLDGMHHPIQMKPADSENRN---ERKLFVGMLNKKYTEADVRQLFTGHGTIEECT 412
            .||:||||||||.||||||||||||||..|   :||||:||::||..|.|:|.:|:.:|.||||.
Zfish   120 EAQNALHNIKTLTGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPYGQIEECR 184

  Fly   413 VLRDQAGQSKGCAFVTFATKQNAIGAIKALHQSQTMEGCSAPLVVKFADTQKEKDQKKMQQIHAF 477
            :||...|.|:|||||||:|:..|..||||:||||||||||:|:|||||||||:|:|:::||..|.
Zfish   185 ILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPMVVKFADTQKDKEQRRLQQQLAQ 249

  Fly   478 CGINTPSGATAGAATPTINAATALIAAPPSAGRTNPSMAAALAAVPQVQQAGSAATAPTTLVPLN 542
            ......|.:..|:.|.........:|.........|:.:.|.||...:|||.|::.       |.
Zfish   250 QMQQLNSASAWGSLTGLTGLTPQYLAVRGHTHAATPTSSTANAAAALLQQATSSSN-------LG 307

  Fly   543 STTALSASLTPNLL-ATNAAHQGAAAAAAYLGADPAAAAHLQLYQQLHGYGLSPAHYLPGLNFHH 606
            :.:.:......|.| ..|.|...||||||...|.|:.|:.|                        
Zfish   308 AFSGIQQMAGMNALQLQNLATLAAAAAAAQSSASPSTASAL------------------------ 348

  Fly   607 PPENSAHHSQHSPGIGGASAASLSAAAATAASNPLGGAPPPTPTPTSSAGHAAGAGLLAAPSMSM 671
                    :..:..:|..::.:.|.|.::||...||           |.|...|   ||..::.:
Zfish   349 --------TSSTGSLGALASPAGSTANSSAAMGSLG-----------SLGTLQG---LAGATVGL 391

  Fly   672 QNLVALLATPTAHHQLSLHHSSSSSGHNNGNSSATSGLHNQRLTYAAAPPPPPISTTYNMPQLIG 736
            .|:.||..:....|.||            |.::...||.:..|:..:|.|...::..|:..|...
Zfish   392 NNINALAGSVNIAHMLS------------GMAALNGGLGSTGLSNGSAGPMDALTQAYSGIQQYA 444

  Fly   737 HTATPTQPGGSSQSLTFNALWPPNAADPYSSSLSGLTNGAAYGAASQPVTTSALQAAAAGVTGKQ 801
            ..|.||.                     ||.||                    ||..:|  .|.|
Zfish   445 AAALPTL---------------------YSQSL--------------------LQQQSA--AGSQ 466

  Fly   802 IEGPDGSNLFIYHLPQEFIDTDLASTFLPFGNVLSAKVFIDKQTNLSKCFGFVSYDNPHSANAAI 866
            .|||:|:|||||||||||.|.|:...|:|||||:||||||||||||||||||||||||.||.|||
Zfish   467 KEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVVSAKVFIDKQTNLSKCFGFVSYDNPVSAQAAI 531

  Fly   867 QAMHGFQIGSKRLKVQLKRSKDAAKPY 893
            |||:|||||.|||||||||||:.:|||
Zfish   532 QAMNGFQIGMKRLKVQLKRSKNDSKPY 558

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bru2NP_001036356.1 RRM1_CELF1_2_Bruno 294..375 CDD:241075 54/82 (66%)
RRM2_Bruno_like 381..461 CDD:241080 49/79 (62%)
RRM_SF 801..892 CDD:302621 72/90 (80%)
celf2XP_021330627.1 RRM1_CELF1_2_Bruno 61..144 CDD:241075 54/82 (66%)
RRM2_CELF1_2 153..233 CDD:241078 49/79 (62%)
RRM3_CELF1_2 466..557 CDD:241082 72/90 (80%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170579920
Domainoid 1 1.000 95 1.000 Domainoid score I7346
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H4783
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1209165at2759
OrthoFinder 1 1.000 - - FOG0000286
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24012
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2990
SonicParanoid 1 1.000 - - X208
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
98.980

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