DRSC/TRiP Functional Genomics Resources

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Protein Alignment bru2 and celf2

DIOPT Version :10

Sequence 1:NP_001036356.1 Gene:bru2 / 250811 FlyBaseID:FBgn0262475 Length:893 Species:Drosophila melanogaster
Sequence 2:NP_001429879.1 Gene:celf2 / 373117 ZFINID:ZDB-GENE-030826-35 Length:552 Species:Danio rerio


Alignment Length:615 Identity:273/615 - (44%)
Similarity:343/615 - (55%) Gaps:126/615 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   288 DQPDADNIKMFVGQIPKTWDETRLRQMFEQFGPVHTLNVLRDKVTS--ISRGCCFVTYYTRKAAL 350
            ||||.|.|||||||||::|.|..|:::||.:|.|:.:|:|||:..:  .|:||||||:|||||||
Zfish    55 DQPDPDAIKMFVGQIPRSWSEKELKELFEPYGAVYQINILRDRSQNPPQSKGCCFVTFYTRKAAL 119

  Fly   351 RAQDALHNIKTLDGMHHPIQMKPADSENRN---ERKLFVGMLNKKYTEADVRQLFTGHGTIEECT 412
            .||:||||||||.||||||||||||||..|   :||||:||::||..|.|:|.:|:.:|.||||.
Zfish   120 EAQNALHNIKTLTGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPYGQIEECR 184

  Fly   413 VLRDQAGQSKGCAFVTFATKQNAIGAIKALHQSQTMEGCSAPLVVKFADTQKEKDQKKMQQIHAF 477
            :||...|.|:|||||||:|:..|..||||:||||||||||:|:|||||||||:|:|:::||    
Zfish   185 ILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPMVVKFADTQKDKEQRRLQQ---- 245

  Fly   478 CGINTPSGATAGAATPTINAATALIAAPPSAGRTNPSMAAALAAVPQVQQAGSAATAPTTLVPLN 542
                                                      ....|:||..||:.       ..
Zfish   246 ------------------------------------------QLAQQMQQLNSASA-------WG 261

  Fly   543 STTALSASLTPNLLATNAAHQGAAAAAAYLGADPAAAAHLQLYQQLHGYG-LSPAHYLPGLNFHH 606
            |.|.|: .|||..||.. .|..||...:  ....||||.||........| .|....:.|:|   
Zfish   262 SLTGLT-GLTPQYLAVR-GHTHAATPTS--STANAAAALLQQATSSSNLGAFSGIQQMAGMN--- 319

  Fly   607 PPENSAHHSQHSPGIGGASAASLSAAAATAASNPLGGAPPPTPTP-TSSAGHAAGAGLLAAPSMS 670
                         .:...:.|:|:||||.|.|:    |.|.|.:. |||.|   ..|.||:|:.|
Zfish   320 -------------ALQLQNLATLAAAAAAAQSS----ASPSTASALTSSTG---SLGALASPAGS 364

  Fly   671 MQNLVALLATPTAHHQLSLHHSSSSSGHNNGNSSATSGLHNQRLTYAAAPPPPPISTTYNMPQLI 735
            ..|..|.:.            |..|.|...|.:.||.||:|   ..|.|      .:..:|..|.
Zfish   365 TANSSAAMG------------SLGSLGTLQGLAGATVGLNN---INALA------GSVNSMAALN 408

  Fly   736 GHTATPTQPGGSSQSLTFNALWPPNAADPYSSSLSGLTNGAAYGAASQPV--TTSALQAAAAGVT 798
            |...:.....||:..:           |..:.:.||:..   |.||:.|.  :.|.||..:|  .
Zfish   409 GGLGSTGLSNGSAGPM-----------DALTQAYSGIQQ---YAAAALPTLYSQSLLQQQSA--A 457

  Fly   799 GKQIEGPDGSNLFIYHLPQEFIDTDLASTFLPFGNVLSAKVFIDKQTNLSKCFGFVSYDNPHSAN 863
            |.|.|||:|:|||||||||||.|.|:...|:|||||:||||||||||||||||||||||||.||.
Zfish   458 GSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVVSAKVFIDKQTNLSKCFGFVSYDNPVSAQ 522

  Fly   864 AAIQAMHGFQIGSKRLKVQLKRSKDAAKPY 893
            ||||||:|||||.|||||||||||:.:|||
Zfish   523 AAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 552

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bru2NP_001036356.1 RRM_SF 294..375 CDD:473069 54/82 (66%)
RRM_SF 381..461 CDD:473069 49/79 (62%)
RRM_SF 801..892 CDD:473069 72/90 (80%)
celf2NP_001429879.1 None

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