Protein Alignment bru2 and elav

DIOPT Version :9

• Sequence 1: NP_001036356.1
• Gene: bru2 / 250811
• FlyBaseID: FBgn0262475
• Length: 893
• Species: Drosophila melanogaster
• Sequence 2: NP_001245447.1
• Gene: elav / 31000
• FlyBaseID: FBgn0260400
• Length: 483
• Species: Drosophila melanogaster
• Alignment Length: 825
• Identity: 159/825 - (19%)
• Similarity: 234/825 - (28%)
• Gaps: 373/825 - (45%)

  Fly    86 NTGNNSQQQQQQQQQHPQILPVKYEYLENLTSSGATSGAIAATTTFTGAAKSFHPYLRPTGSGSN 150
            |||.......|.|                |..|.|.:.|:|||
  Fly     7 NTGAGGGVDTQAQ----------------LMQSAAAAAAVAAT---------------------- 33

  Fly   151 SNNSIAALSTTTAATAAKMSTTLFETLLHNQINSSPIALPAATAIAAISAAATAATATPGTAATA 215
              |:.||.....||.||...      |...|:..:.:.:.......|::|||.|.|........|
  Fly    34 --NAAAAPVQNAAAVAAAAQ------LQQQQVQQAILQVQQQQTQQAVAAAAAAVTQQLQQQQQA 90

  Fly   216 AAAAAAAPSTQLNSSINSRTSLGDQGGAIVVVTPAPPVAAPPTGGPNRNQSPTRDCSVKMELMES 280
            ..|..|....|...:    .::..|......|.|.|..|.|.|.|...:.|            ::
  Fly    91 VVAQQAVVQQQQQQA----AAVVQQAAVQQAVVPQPQQAQPNTNGNAGSGS------------QN 139

  Fly   281 TSPDSIKDQPDADNIKMFVGQIPKTWDETRLRQMFEQFGPVHTLNVLRDK-------------VT 332
            .|..|.:.:.:     :.|..:|:|..|..:|.:|...|.:.::.::|||             ..
  Fly   140 GSNGSTETRTN-----LIVNYLPQTMTEDEIRSLFSSVGEIESVKLIRDKSQVYIDPLNPQAPSK 199

  Fly   333 SISRGCCFVTYYTRKAALRAQDALHNIKTLDGMHHPIQMKP-------ADSENRNERKLFVGMLN 390
            ..|.|..||.|      :|.|||...:..|:|:.  :|.|.       ..|:......|:|..|.
  Fly   200 GQSLGYGFVNY------VRPQDAEQAVNVLNGLR--LQNKTIKVSFARPSSDAIKGANLYVSGLP 256

  Fly   391 KKYTEADVRQLFTGHGTIEECTVLRDQAG---QSKGCAFVTFATKQNAIGAIKALHQSQTMEGCS 452
            |..|:.::..:|...|.|....:|:: ||   |:||..|:.|..::.|..||.||: ..|...|:
  Fly   257 KTMTQQELEAIFAPFGAIITSRILQN-AGNDTQTKGVGFIRFDKREEATRAIIALN-GTTPSSCT 319

  Fly   453 APLVVKFADTQKEKDQKKMQQIHAFCGINTPSGATAGAATPTINAATALIAAPPSAGRTNPSMAA 517
            .|:||||:                    |||             .:|:.|..|......||.:
  Fly   320 DPIVVKFS--------------------NTP-------------GSTSKIIQPQLPAFLNPQL-- 349

  Fly   518 ALAAVPQVQQAGSAATAPTTLVPLNSTTALSASLTPNLLATNAAHQGAAAAAAYLGADPAAAAHL 582
                   |::.|.|...|                         .::|.|..:      |.|...|
  Fly   350 -------VRRIGGAMHTP-------------------------VNKGLARFS------PMAGDML 376

  Fly   583 QLYQQLHGYGLSPAHYLPGLNFHHPPENSAHHSQHSPGIGGASAASLSAAAATAASNPLGGAPPP 647
            .:             .||.                  |:|.|     :|||.|.||.| |||.|
  Fly   377 DV-------------MLPN------------------GLGAA-----AAAATTLASGP-GGAYP- 403

  Fly   648 TPTPTSSAGHAAGAGLLAAPSMSMQNLVALLATPTAHHQLSLHHSSSSSGHNNGNSSATSGLHNQ 712
                                                                             
  Fly   404 ----------------------------------------------------------------- 403

  Fly   713 RLTYAAAPPPPPISTTYNMPQLIGHTATPTQPGGSSQSLTFNALWPPNAADPYSSSLSGLTNGAA 777
                                                                             
  Fly   404 ----------------------------------------------------------------- 403

  Fly   778 YGAASQPVTTSALQAAAAGVTGKQIEGPDGSNLFIYHLPQEFIDTDLASTFLPFGNVLSAKVFID 842
                                            :|||:|..|..:..|...|.|||.|.|.|:..|
  Fly   404 --------------------------------IFIYNLAPETEEAALWQLFGPFGAVQSVKIVKD 436

  Fly   843 KQTNLSKCFGFVSYDNPHSANAAIQAMHGFQIGSKRLKVQLKRSK 887
            ..||..|.:||||..|...|..||:|::|:.:|::.|:|..|.:|
  Fly   437 PTTNQCKGYGFVSMTNYDEAAMAIRALNGYTMGNRVLQVSFKTNK 481

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
bru2	NP_001036356.1	RRM1_CELF1_2_Bruno	294..375	CDD:241075	23/100 (23%)
		RRM2_Bruno_like	381..461	CDD:241080	28/82 (34%)
		RRM_SF	801..892	CDD:302621	32/87 (37%)
elav	NP_001245447.1	ELAV_HUD_SF	146..483	CDD:273741	117/624 (19%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	1	1.050	76	1.000	Inparanoid score	I1646
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	2	1.960