DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment bru2 and SPAC328.05

DIOPT Version :9

Sequence 1:NP_001036356.1 Gene:bru2 / 250811 FlyBaseID:FBgn0262475 Length:893 Species:Drosophila melanogaster
Sequence 2:NP_594207.3 Gene:SPAC328.05 / 2542567 PomBaseID:SPAC328.05 Length:464 Species:Schizosaccharomyces pombe


Alignment Length:529 Identity:103/529 - (19%)
Similarity:180/529 - (34%) Gaps:143/529 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   227 LNSSINSRTSLGDQGGAIVVVTPAPPVAAPPTGGPNRNQSPTRDCSVKMELMESTSPDSIKDQPD 291
            ::||:||.:|..|:                     :|::||.|..:....|......|....:.|
pombe    20 VSSSLNSSSSNMDR---------------------DRSESPKRHVNGSNSLKRGLHFDGEHTERD 63

  Fly   292 ----------ADNIKMFVGQI--PKTWDETRLRQMFEQFGPVHTLNVLRDKVTSISRGCCFVTYY 344
                      ....:::||.:  ...|.|  |::...|.|.|....:| :....:|:||..:.|.
pombe    64 PHLGNGQKYTQQERRVYVGNLSYQVRWFE--LKEFMGQVGNVLNCEIL-NLPNGLSKGCAIIEYS 125

  Fly   345 TRKAALRAQDALHNIKTLDGMHH------------PIQMKPADSEN----RNERKLFVGMLNKKY 393
            |.:.|..|...|.|.|.:..:.:            ...:.|:.|.|    ..:|:||||.|....
pombe   126 TAEEARTAIKTLSNQKFMGRLVYIREDREQNARFGSSSVSPSASSNGKDSEPDRQLFVGNLPYNV 190

  Fly   394 TEADVRQLFTGHGTIEECTVLRDQAGQSKGCAFVTFATKQNAIGAIKALHQSQTMEGCSAPLVVK 458
            ...|::.||...|::....:..:|.|:|:|...|..::.:.|:.||:.||.:..|.......:.:
pombe   191 RWQDLKDLFRQAGSVIRADIQMNQEGRSRGIGIVVMSSMKEAMHAIQMLHNTDFMGRTLEVRLDR 255

  Fly   459 FADTQKEKDQKKMQQIHAFCGINTPSGATAGAATPTINAATALIAAPPSAGRTNPSMAAALAAVP 523
            ||     ..:.|....|                               ..|.|.|:         
pombe   256 FA-----HHKSKPYSTH-------------------------------GNGYTFPA--------- 275

  Fly   524 QVQQAGSAATAPTTLVPLNSTTALSASLTPNLLATNAAHQGAAAAAAYLGADPAAAAH---LQLY 585
            ::|.     |..:|.:|:     |.|:.....|..:|...|..:...|:|..|.|.:.   |.|:
pombe   276 EMQM-----TTSSTYLPM-----LGANTQVEDLVYHAYPHGPCSDCIYVGNLPWATSDRNLLDLF 330

  Fly   586 QQL----------------HGYGL----------SPAHYLPGLNFHHPP--ENSAHHSQHSPGIG 622
            ..:                .|:|:          |....|.|..:...|  .:.||::...|.: 
pombe   331 TDIGSVIRARIAYEPTGRSKGFGVVQFENENDAASSIEKLNGYRYGGRPLQLSYAHYATPLPAV- 394

  Fly   623 GASAASLSAAAATAASNPLGGAPPPTPTPTSSAGHAAGAGLLAAPSMSMQNLVALLATPTAHHQL 687
               ...||...:.|.:.|:...|......|..:...:..|.|.. ||.:.|:.|:.....|..:.
pombe   395 ---PTVLSGLPSVAYTPPVMHIPTTNSPLTPQSFTNSFLGYLPI-SMPVANMPAIAPISVALPEN 455

  Fly   688 SLHHSSSSS 696
            ::.||...|
pombe   456 NIEHSLEPS 464

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bru2NP_001036356.1 RRM1_CELF1_2_Bruno 294..375 CDD:241075 20/94 (21%)
RRM2_Bruno_like 381..461 CDD:241080 22/79 (28%)
RRM_SF 801..892 CDD:302621
SPAC328.05NP_594207.3 RRM 71..387 CDD:223796 72/373 (19%)
RRM_SF 79..150 CDD:240668 19/73 (26%)
RRM3_hnRNPM_like 181..252 CDD:240833 20/70 (29%)
RRM_SF 312..385 CDD:302621 12/72 (17%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.