DRSC/TRiP Functional Genomics Resources

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Protein Alignment bru2 and unc-75

DIOPT Version :9

Sequence 1:NP_001036356.1 Gene:bru2 / 250811 FlyBaseID:FBgn0262475 Length:893 Species:Drosophila melanogaster
Sequence 2:NP_492958.3 Gene:unc-75 / 182722 WormBaseID:WBGene00006807 Length:514 Species:Caenorhabditis elegans


Alignment Length:634 Identity:237/634 - (37%)
Similarity:320/634 - (50%) Gaps:140/634 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   274 KMELMESTSPDS----IKDQPDADNIKMFVGQIPKTWDETRLRQMFEQFGPVHTLNVLRDKVTSI 334
            :|....::|.||    :|| |||  ||:||||||:..:|..||.:|||||.::...:|:||.|.:
 Worm     7 EMRASSTSSTDSNGFPVKD-PDA--IKLFVGQIPRNLEEKDLRHLFEQFGKIYEFTILKDKYTGM 68

  Fly   335 SRGCCFVTYYTRKAALRAQDALHNIKTLDGMHHPIQMKPADSENR--------NERKLFVGMLNK 391
            .:||.|:||..|.:|:|.|..||:.|||.||:..:|:||||:::|        :::|||:|||:|
 Worm    69 HKGCAFLTYCHRDSAVRCQATLHDQKTLPGMNRAMQVKPADTDSRPASPKDKMDDKKLFIGMLSK 133

  Fly   392 KYTEADVRQLFTGHGTIEECTVLRDQAGQSKGCAFVTFATKQNAIGAIKALHQSQTMEGCSAPLV 456
            :.:|.:||.||...|.::|.||||...|.|||||||.:....:|..||.|||.||||.|.|:.||
 Worm   134 QQSEDEVRALFATFGELDEVTVLRGADGASKGCAFVKYKHGLDAHMAISALHGSQTMPGASSSLV 198

  Fly   457 VKFADTQKEKDQKKMQQIHAFCGINTPSGATAGAATPTINAATALIAAPPSAGRTNPSMAAALAA 521
            ||:|||:||:..::|||:.|..|:..|  ..........||...::.....|.:|| :||:| |.
 Worm   199 VKYADTEKERQNRRMQQMAAQMGMLNP--MLVNQVGMQYNAYQQVLQQQSLAAQTN-AMASA-AY 259

  Fly   522 VPQVQQAGSAATAPTTLVPLNSTTALSASLTPNLLATNAAHQGAAAAAAYLGADPAAAAHLQLYQ 586
            :|.:||   ..|.|..::.|.                      ||||||...|:|..:...|..|
 Worm   260 LPLLQQ---QTTDPLHVLQLQ----------------------AAAAAAQAAANPVLSQQTQQQQ 299

  Fly   587 QLHGYGLSPAHYLPGLNFHHPPENSAHHSQHSPGIGGASAASLSAAAATAASNPLGGAPPPTPTP 651
            |                           .|..      .||.|...:| ||.||           
 Worm   300 Q---------------------------QQQQ------LAAQLQLQSA-AAQNP----------- 319

  Fly   652 TSSAGHAAGAGLLAAPSMSMQNLVALLATPTAHHQLSLHHSSSSSGHNNGNSSATSGLHNQRLTY 716
                 |.|    |||.:::.|..........||....:|.      |.....::|:         
 Worm   320 -----HYA----LAAQALAQQQAAQQAQAVVAHSHAQVHQ------HQTAQVTSTA--------- 360

  Fly   717 AAAPPPPPISTTYNMPQLIGHTATPTQPGGSSQSLTFNALWPPNAADPYSSSLSGLTNGAAYGAA 781
                               .|..| ..|..||    :.:|....||..|||.|||:.:.....||
 Worm   361 -------------------SHAQT-ENPAASS----YGSLAAAAAAANYSSLLSGMESQHNAAAA 401

  Fly   782 SQPVTTSALQAAAA--GVTGKQIEGPDGSNLFIYHLPQEFIDTDLASTFLPFGNVLSAKVFIDKQ 844
            .| :.....|||||  .||.:::.||||.|||||||||||.|.:|...|.|||:::|||||:|:.
 Worm   402 LQ-LAQIQQQAAAALPMVTPREVLGPDGCNLFIYHLPQEFGDAELIQMFAPFGHIVSAKVFVDRA 465

  Fly   845 TNLSKCFGFVSYDNPHSANAAIQAMHGFQIGSKRLKVQLKRSKDAAKPY 893
            ||.|||||||||||.||:.|||.||:|||||.|||||||||.::.::||
 Worm   466 TNQSKCFGFVSYDNIHSSQAAITAMNGFQIGMKRLKVQLKRPRNESRPY 514

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bru2NP_001036356.1 RRM1_CELF1_2_Bruno 294..375 CDD:241075 39/80 (49%)
RRM2_Bruno_like 381..461 CDD:241080 42/79 (53%)
RRM_SF 801..892 CDD:302621 61/90 (68%)
unc-75NP_492958.3 RRM1_CELF3_4_5_6 24..110 CDD:241076 45/88 (51%)
RRM_SF 123..203 CDD:388407 42/79 (53%)
RRM3_CELF3_4_5_6 425..503 CDD:241083 56/77 (73%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0144
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1209165at2759
OrthoFinder 1 1.000 - - FOG0000286
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100683
Panther 1 1.100 - - O PTHR24012
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3223
SonicParanoid 1 1.000 - - X208
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
98.810

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