DRSC/TRiP Functional Genomics Resources

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Protein Alignment bru2 and EEED8.4

DIOPT Version :9

Sequence 1:NP_001036356.1 Gene:bru2 / 250811 FlyBaseID:FBgn0262475 Length:893 Species:Drosophila melanogaster
Sequence 2:NP_495022.2 Gene:EEED8.4 / 173921 WormBaseID:WBGene00017135 Length:191 Species:Caenorhabditis elegans


Alignment Length:95 Identity:22/95 - (23%)
Similarity:43/95 - (45%) Gaps:1/95 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly   792 AAAAGVTGKQIEGPDGSNLFIYHLPQEFIDTDLASTFLPFGNVLSAKVFIDKQTNLSKCFGFVSY 856
            ||....|.::.:..|..::||.::.......::...|...|.::...:..||.|...|.|.::.:
 Worm    39 AAYVPPTEEEQKAIDAKSVFIGNVDFNSTIEEIEEHFKGCGQIVKTTIPKDKFTKKQKNFAYIEF 103

  Fly   857 DNPHSANAAIQAMHGFQIGSKRLKVQLKRS 886
            |:..|...|: .|:|....|:.:.|..||:
 Worm   104 DDSSSIENAL-VMNGSLFRSRPIVVTAKRT 132

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bru2NP_001036356.1 RRM1_CELF1_2_Bruno 294..375 CDD:241075
RRM2_Bruno_like 381..461 CDD:241080
RRM_SF 801..892 CDD:302621 19/86 (22%)
EEED8.4NP_495022.2 RRM <2..>127 CDD:223796 19/88 (22%)
RRM_II_PABPs 56..128 CDD:240752 15/72 (21%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160158897
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.930

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