DRSC/TRiP Functional Genomics Resources

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Protein Alignment bru2 and Celf2

DIOPT Version :9

Sequence 1:NP_001036356.1 Gene:bru2 / 250811 FlyBaseID:FBgn0262475 Length:893 Species:Drosophila melanogaster
Sequence 2:XP_030103179.1 Gene:Celf2 / 14007 MGIID:1338822 Length:536 Species:Mus musculus


Alignment Length:637 Identity:265/637 - (41%)
Similarity:335/637 - (52%) Gaps:182/637 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   288 DQPDADNIKMFVGQIPKTWDETRLRQMFEQFGPVHTLNVLRDKVTS--ISRGCCFVTYYTRKAAL 350
            ||||.|.|||||||||::|.|..|:::||.:|.|:.:|||||:..:  .|:||||||:|||||||
Mouse    51 DQPDPDAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAAL 115

  Fly   351 RAQDALHNIKTLDGMHHPIQMKPADSENRN---ERKLFVGMLNKKYTEADVRQLFTGHGTIEECT 412
            .||:||||||||.||||||||||||||..|   :||||:||::||..|.|:|.:|:..|.||||.
Mouse   116 EAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQIEECR 180

  Fly   413 VLRDQAGQSKGCAFVTFATKQNAIGAIKALHQSQTMEGCSAPLVVKFADTQKEKDQKKMQQIHAF 477
            :||...|.|:|||||||:|:..|..||||:||||||||||:|:|||||||||:|:|:::||    
Mouse   181 ILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKEQRRLQQ---- 241

  Fly   478 CGINTPSGATAGAATPTINAATALIAAPPSAGRTNPSMAAALAAVPQVQQAGSAATAPTTLVPLN 542
                                                      ....|:||..:|.        ..
Mouse   242 ------------------------------------------QLAQQMQQLNTAT--------WG 256

  Fly   543 STTALSASLTPNLLATNAAHQGAAAAAAYLGADPAAAAHLQLYQQLHGYGLSPAHYLPGLNFHHP 607
            :.|.| ..|||..||.    ...|.:::.|||                  .|....:.|:|    
Mouse   257 NLTGL-GGLTPQYLAL----LQQATSSSNLGA------------------FSGIQQMAGMN---- 294

  Fly   608 PENSAHHSQHSPGIGGASAASLSAAAATAASNPLGG---------APPPTPTPTSSAGHAAGAGL 663
                |...|:...:..|:||:.::|.:|.| |||..         :|....||.|:||.|     
Mouse   295 ----ALQLQNLATLAAAAAAAQTSATSTNA-NPLSSTSSALGALTSPVAASTPNSTAGAA----- 349

  Fly   664 LAAPSMSMQNLVALLATPTAHHQLSLHHSSSSSGHNNGNSSATSGLHNQRLTYAAAPPPPPISTT 728
                   |.:|.:|                   |...|.:.||.||:|..          .::.|
Mouse   350 -------MNSLTSL-------------------GTLQGLAGATVGLNNIN----------ALAGT 378

  Fly   729 YNMPQLIGHTATPTQPGGSSQSLTFNALWPPNAADPYSSSLSGLTNGAA---------------Y 778
            .|:.|::...|...  ||                    ...:|||||.|               |
Mouse   379 INIAQMLSGMAALN--GG--------------------LGATGLTNGTAGTMDALTQAYSGIQQY 421

  Fly   779 GAASQPV--TTSALQAAAAGVTGKQIEGPDGSNLFIYHLPQEFIDTDLASTFLPFGNVLSAKVFI 841
            .||:.|.  :.|.||..:|  .|.|.|||:|:|||||||||||.|.|:...|:|||||:||||||
Mouse   422 AAAALPTLYSQSLLQQQSA--AGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFI 484

  Fly   842 DKQTNLSKCFGFVSYDNPHSANAAIQAMHGFQIGSKRLKVQLKRSKDAAKPY 893
            ||||||||||||||||||.||.||||||:|||||.|||||||||||:.:|||
Mouse   485 DKQTNLSKCFGFVSYDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 536

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bru2NP_001036356.1 RRM1_CELF1_2_Bruno 294..375 CDD:241075 55/82 (67%)
RRM2_Bruno_like 381..461 CDD:241080 49/79 (62%)
RRM_SF 801..892 CDD:302621 72/90 (80%)
Celf2XP_030103179.1 RRM1_CELF1_2_Bruno 57..140 CDD:241075 55/82 (67%)
RRM2_CELF1_2 149..229 CDD:241078 49/79 (62%)
RRM3_CELF1_2 444..535 CDD:241082 72/90 (80%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167836406
Domainoid 1 1.000 97 1.000 Domainoid score I7221
eggNOG 1 0.900 - - E1_KOG0144
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H4783
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000286
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24012
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2990
SonicParanoid 1 1.000 - - X208
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1110.830

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