DRSC/TRiP Functional Genomics Resources

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Protein Alignment bru2 and Celf2

DIOPT Version :10

Sequence 1:NP_001036356.1 Gene:bru2 / 250811 FlyBaseID:FBgn0262475 Length:893 Species:Drosophila melanogaster
Sequence 2:NP_001393872.1 Gene:Celf2 / 14007 MGIID:1338822 Length:546 Species:Mus musculus


Alignment Length:625 Identity:265/625 - (42%)
Similarity:335/625 - (53%) Gaps:164/625 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   288 DQPDADNIKMFVGQIPKTWDETRLRQMFEQFGPVHTLNVLRDKVTS--ISRGCCFVTYYTRKAAL 350
            ||||.|.|||||||||::|.|..|:::||.:|.|:.:|||||:..:  .|:||||||:|||||||
Mouse    67 DQPDPDAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAAL 131

  Fly   351 RAQDALHNIKTLDGMHHPIQMKPADSENRN---ERKLFVGMLNKKYTEADVRQLFTGHGTIEECT 412
            .||:||||||||.||||||||||||||..|   :||||:||::||..|.|:|.:|:..|.||||.
Mouse   132 EAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQIEECR 196

  Fly   413 VLRDQAGQSKGCAFVTFATKQNAIGAIKALHQSQTMEGCSAPLVVKFADTQKEKDQKKMQQIHAF 477
            :||...|.|:|||||||:|:..|..||||:||||||||||:|:|||||||||:|:|:::||    
Mouse   197 ILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKEQRRLQQ---- 257

  Fly   478 CGINTPSGATAGAATPTINAATALIAAPPSAGRTNPSMAAALAAVPQVQQAGSAATAPTTLVPLN 542
                                                      ....|:||..:|.        ..
Mouse   258 ------------------------------------------QLAQQMQQLNTAT--------WG 272

  Fly   543 STTALSASLTPNLLATNAAHQGAAAAAAYLGADPAAAAHLQLYQQLHGYGLSPAHYLPGLNFHHP 607
            :.|.| ..|||..||.    ...|.:::.|||                  .|....:.|:|    
Mouse   273 NLTGL-GGLTPQYLAL----LQQATSSSNLGA------------------FSGIQQMAGMN---- 310

  Fly   608 PENSAHHSQHSPGIGGASAASLSAAAATAASNPLGG---------APPPTPTPTSSAGHAAGAGL 663
                |...|:...:..|:||:.::|.:|.| |||..         :|....||.|:||.|     
Mouse   311 ----ALQLQNLATLAAAAAAAQTSATSTNA-NPLSSTSSALGALTSPVAASTPNSTAGAA----- 365

  Fly   664 LAAPSMSMQNLVALLATPTAHHQLSLHHSSSSSGHNNGNSSATSGLHNQRLTYAAAPPPPPISTT 728
                   |.:|.:|                   |...|.:.||.||:|   ..|.|      .|.
Mouse   366 -------MNSLTSL-------------------GTLQGLAGATVGLNN---INALA------GTI 395

  Fly   729 YNMPQL---IGHTATPTQPGGSSQSLTFNALWPPNAADPYSSSLSGLTNGAAYGAASQPV--TTS 788
            .:|..|   :|.|.......|:..:||              .:.||:..   |.||:.|.  :.|
Mouse   396 NSMAALNGGLGATGLTNGTAGTMDALT--------------QAYSGIQQ---YAAAALPTLYSQS 443

  Fly   789 ALQAAAAGVTGKQIEGPDGSNLFIYHLPQEFIDTDLASTFLPFGNVLSAKVFIDKQTNLSKCFGF 853
            .||..:|  .|.|.|||:|:|||||||||||.|.|:...|:|||||:||||||||||||||||||
Mouse   444 LLQQQSA--AGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGF 506

  Fly   854 VSYDNPHSANAAIQAMHGFQIGSKRLKVQLKRSKDAAKPY 893
            ||||||.||.||||||:|||||.|||||||||||:.:|||
Mouse   507 VSYDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 546

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bru2NP_001036356.1 RRM_SF 294..375 CDD:473069 55/82 (67%)
RRM_SF 381..461 CDD:473069 49/79 (62%)
RRM_SF 801..892 CDD:473069 72/90 (80%)
Celf2NP_001393872.1 RRM1_CELF1_2_Bruno 73..156 CDD:410040 55/82 (67%)
RRM2_CELF1_2 165..245 CDD:410042 49/79 (62%)
RRM3_CELF1_2 454..545 CDD:241082 72/90 (80%)

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