DRSC/TRiP Functional Genomics Resources

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Protein Alignment bru2 and CELF2

DIOPT Version :9

Sequence 1:NP_001036356.1 Gene:bru2 / 250811 FlyBaseID:FBgn0262475 Length:893 Species:Drosophila melanogaster
Sequence 2:XP_024303540.1 Gene:CELF2 / 10659 HGNCID:2550 Length:549 Species:Homo sapiens


Alignment Length:637 Identity:267/637 - (41%)
Similarity:336/637 - (52%) Gaps:182/637 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   288 DQPDADNIKMFVGQIPKTWDETRLRQMFEQFGPVHTLNVLRDKVTS--ISRGCCFVTYYTRKAAL 350
            ||||.|.|||||||||::|.|..|:::||.:|.|:.:|||||:..:  .|:||||||:|||||||
Human    64 DQPDPDAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAAL 128

  Fly   351 RAQDALHNIKTLDGMHHPIQMKPADSENRN---ERKLFVGMLNKKYTEADVRQLFTGHGTIEECT 412
            .||:||||||||.||||||||||||||..|   :||||:||::||..|.|:|.:|:..|.||||.
Human   129 EAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQIEECR 193

  Fly   413 VLRDQAGQSKGCAFVTFATKQNAIGAIKALHQSQTMEGCSAPLVVKFADTQKEKDQKKMQQIHAF 477
            :||...|.|:|||||||:|:..|..||||:||||||||||:|:|||||||||:|:|:::||    
Human   194 ILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKEQRRLQQ---- 254

  Fly   478 CGINTPSGATAGAATPTINAATALIAAPPSAGRTNPSMAAALAAVPQVQQAGSAATAPTTLVPLN 542
                                                      ....|:||..:|.        ..
Human   255 ------------------------------------------QLAQQMQQLNTAT--------WG 269

  Fly   543 STTALSASLTPNLLATNAAHQGAAAAAAYLGADPAAAAHLQLYQQLHGYGLSPAHYLPGLNFHHP 607
            :.|.| ..|||..||.    ...|.:::.|||                  .|....:.|:|    
Human   270 NLTGL-GGLTPQYLAL----LQQATSSSNLGA------------------FSGIQQMAGMN---- 307

  Fly   608 PENSAHHSQHSPGIGGASAASLSAAAATAASNPLG------GA---PPPTPTPTSSAGHAAGAGL 663
                |...|:...:..|:||:.::|.:|.| |||.      ||   |....||.|:||.|     
Human   308 ----ALQLQNLATLAAAAAAAQTSATSTNA-NPLSTTSSALGALTSPVAASTPNSTAGAA----- 362

  Fly   664 LAAPSMSMQNLVALLATPTAHHQLSLHHSSSSSGHNNGNSSATSGLHNQRLTYAAAPPPPPISTT 728
                   |.:|.:|                   |...|.:.||.||:|..          .::.|
Human   363 -------MNSLTSL-------------------GTLQGLAGATVGLNNIN----------ALAGT 391

  Fly   729 YNMPQLIGHTATPTQPGGSSQSLTFNALWPPNAADPYSSSLSGLTNGAA---------------Y 778
            .|:.|::...|...  ||                    ...:|||||.|               |
Human   392 INIAQMLSGMAALN--GG--------------------LGATGLTNGTAGTMDALTQAYSGIQQY 434

  Fly   779 GAASQPV--TTSALQAAAAGVTGKQIEGPDGSNLFIYHLPQEFIDTDLASTFLPFGNVLSAKVFI 841
            .||:.|.  :.|.||..:|  .|.|.|||:|:|||||||||||.|.|:...|:|||||:||||||
Human   435 AAAALPTLYSQSLLQQQSA--AGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFI 497

  Fly   842 DKQTNLSKCFGFVSYDNPHSANAAIQAMHGFQIGSKRLKVQLKRSKDAAKPY 893
            ||||||||||||||||||.||.||||||:|||||.|||||||||||:.:|||
Human   498 DKQTNLSKCFGFVSYDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY 549

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bru2NP_001036356.1 RRM1_CELF1_2_Bruno 294..375 CDD:241075 55/82 (67%)
RRM2_Bruno_like 381..461 CDD:241080 49/79 (62%)
RRM_SF 801..892 CDD:302621 72/90 (80%)
CELF2XP_024303540.1 RRM1_CELF1_2_Bruno 70..153 CDD:241075 55/82 (67%)
RRM2_CELF1_2 162..242 CDD:241078 49/79 (62%)
RRM3_CELF1_2 457..548 CDD:241082 72/90 (80%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165146323
Domainoid 1 1.000 97 1.000 Domainoid score I7253
eggNOG 1 0.900 - - E1_KOG0144
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H4783
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1209165at2759
OrthoFinder 1 1.000 - - FOG0000286
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24012
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2990
SonicParanoid 1 1.000 - - X208
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
109.880

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