DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment fdl and HEXO1

DIOPT Version :9

Sequence 1:NP_725178.2 Gene:fdl / 250735 FlyBaseID:FBgn0045063 Length:673 Species:Drosophila melanogaster
Sequence 2:NP_567017.2 Gene:HEXO1 / 824692 AraportID:AT3G55260 Length:541 Species:Arabidopsis thaliana


Alignment Length:620 Identity:169/620 - (27%)
Similarity:248/620 - (40%) Gaps:171/620 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   110 IWPHPTQKFLLSSQTHSFSVEDVQLHVDTAHREVRKQLQLAFDWF--------------LKDLRL 160
            :||.|.: |...::|  .||:.....:...:......::.|||.:              |..:|.
plant    33 LWPLPAE-FSFGNET--LSVDPTVTLIVAGNGGGSLIIRAAFDRYMGIIFKHASGRGSLLSRIRF 94

  Fly   161 IQRLDYVGSSSEPTVSESSSKSRHHADLEPAATLFGATFGVKKAGDLTSVQVKISVLKSGDLNFS 225
            ::.::|                                       |:||:::   |:.|......
plant    95 LKMVEY---------------------------------------DITSLKI---VVHSDSEELQ 117

  Fly   226 LDNDETYQLSTQTEGHRLQV---EIIANSYFGARHGLSTLQQLIWFDDEDHLLHTY-ANSKVKDA 286
            |..||:|.|....:..:..|   .|.||:.:||..||.|..||..||.....:..| |...::|.
plant   118 LGVDESYTLMVSKKNEQSIVGAATIEANTVYGALRGLETFSQLCAFDYITKSVQIYKAPWYIQDK 182

  Fly   287 PKFRYRGLMLDTSRHFFSVESIKRTIVGMGLAKMNRFHWHLTDAQSFPYISRYYPELAVHGAYSE 351
            |:|.||||::|||||:..::.||:.|..|..||:|..|||:.|.||||..:..||.| ..||||.
plant   183 PRFGYRGLLIDTSRHYLPIDVIKQIIESMSFAKLNVLHWHIVDEQSFPLETPTYPNL-WKGAYSR 246

  Fly   352 SETYSEQDVREVAEFAKIYGVQVIPEIDAPAHAGNGWDWGPKRGMGELAMCINQQPW-SFYCGEP 415
            .|.|:.:|..|:..|||:.|:.|:.|:|.|.||.:   ||  .|..:|        | |..|.||
plant   247 WERYTVEDASEIVRFAKMRGINVMAEVDVPGHAES---WG--TGYPDL--------WPSLSCREP 298

  Fly   416 PCGQLNPKNNYTYLILQRIYEELLQHTGPTDFFHLGGDEVNLDCWAQYFNDTDLRGLWCDFMLQA 480
                |:...|:|:.::..|..: ::...|.:.|||||||||.|||.   |.|             
plant   299 ----LDVTKNFTFDVISGILAD-MRKIFPFELFHLGGDEVNTDCWK---NTT------------- 342

  Fly   481 MARLKLANNGVAPKHVAVWSSALTNTKCLPNSQFTVQV--------WGGSTWQENY-----DL-- 530
                          ||..|......|.......|.::.        |....|:|.:     ||  
plant   343 --------------HVKEWLQGRNFTTKDAYKYFVLRAQQIAISKNWTPVNWEETFSSFGKDLDP 393

  Fly   531 ----------------LDNGYNVIFSHVDAWYLDCGFGSWRATGDAACAPYRTWQNVYKHRPWER 579
                            :..|:..|||:...|||           |....|   |:.||...|...
plant   394 RTVIQNWLVSDICQKAVAKGFRCIFSNQGYWYL-----------DHLDVP---WEEVYNTEPLNG 444

  Fly   580 MRLDKKRKKQVLGGEVCMWTEQVDENQLDNRLWPRTAALAERLWTD----PSDDHDMDIVPPDVF 640
            :. |...:|.|:|||||||.|..|.:.:...:|||.||.|||:|:.    ...:..:..:|    
plant   445 IE-DPSLQKLVIGGEVCMWGETADTSVVLQTIWPRAAAAAERMWSTREAVSKGNITLTALP---- 504

  Fly   641 RRISLFRNRLVELGIRAEALFPKYCAQ---NPGEC 672
             |:..||..|...|:.|..:...|..:   .||.|
plant   505 -RLHYFRCLLNNRGVPAAPVDNFYARRPPLGPGSC 538

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fdlNP_725178.2 Glycohydro_20b2 110..265 CDD:291511 32/171 (19%)
GH20_HexA_HexB-like 289..654 CDD:119332 123/400 (31%)
HEXO1NP_567017.2 Glycohydro_20b2 33..160 CDD:373334 32/171 (19%)
GH20_HexA_HexB-like 185..517 CDD:119332 123/400 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG3525
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54329
OrthoDB 1 1.010 - - D545162at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR22600
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X846
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
65.930

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